Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AL117328.2-201ENST00000624617 1940 ntBASIC21.62■■□□□ 1.05
TRBC1P01850 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBC1P01850 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBC1P01850 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBC1P01850 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 ECEL1P1-201ENST00000373592 1742 ntBASIC21.61■■□□□ 1.05
TRBC1P01850 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
TRBC1P01850 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.61■■□□□ 1.05
TRBC1P01850 AL034346.1-201ENST00000568244 1277 ntBASIC21.61■■□□□ 1.05
TRBC1P01850 TPRG1LP1-201ENST00000598702 760 ntBASIC21.61■■□□□ 1.05
TRBC1P01850 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBC1P01850 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 AC123595.1-201ENST00000440769 1046 ntBASIC21.6■■□□□ 1.05
TRBC1P01850 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.6■■□□□ 1.05
TRBC1P01850 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.6■■□□□ 1.05
TRBC1P01850 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRBC1P01850 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBC1P01850 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.6■■□□□ 1.05
TRBC1P01850 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.59■■□□□ 1.05
TRBC1P01850 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TRBC1P01850 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.59■■□□□ 1.05
TRBC1P01850 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.59■■□□□ 1.05
TRBC1P01850 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBC1P01850 AC092053.2-201ENST00000640557 1818 ntBASIC21.59■■□□□ 1.05
TRBC1P01850 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.58■■□□□ 1.05
TRBC1P01850 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBC1P01850 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBC1P01850 AC009237.3-201ENST00000393279 1427 ntBASIC21.58■■□□□ 1.05
TRBC1P01850 AC097381.1-201ENST00000429019 1296 ntBASIC21.58■■□□□ 1.05
TRBC1P01850 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.58■■□□□ 1.05
TRBC1P01850 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRBC1P01850 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.58■■□□□ 1.05
TRBC1P01850 RARRES2P6-201ENST00000567333 442 ntBASIC21.58■■□□□ 1.05
TRBC1P01850 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBC1P01850 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBC1P01850 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TRBC1P01850 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.58■■□□□ 1.04
TRBC1P01850 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRBC1P01850 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRBC1P01850 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRBC1P01850 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBC1P01850 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.57■■□□□ 1.04
TRBC1P01850 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TRBC1P01850 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBC1P01850 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.57■■□□□ 1.04
TRBC1P01850 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TRBC1P01850 MIR6821-201ENST00000617625 74 ntBASIC21.57■■□□□ 1.04
TRBC1P01850 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRBC1P01850 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBC1P01850 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBC1P01850 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.56■■□□□ 1.04
TRBC1P01850 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBC1P01850 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRBC1P01850 MIR935-201ENST00000401179 91 ntBASIC21.56■■□□□ 1.04
TRBC1P01850 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRBC1P01850 AC026271.2-201ENST00000428091 497 ntBASIC21.56■■□□□ 1.04
TRBC1P01850 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.56■■□□□ 1.04
TRBC1P01850 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBC1P01850 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.56■■□□□ 1.04
TRBC1P01850 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TRBC1P01850 LINC02228-203ENST00000641970 1355 ntBASIC21.56■■□□□ 1.04
TRBC1P01850 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRBC1P01850 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRBC1P01850 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.56■■□□□ 1.04
TRBC1P01850 AC005224.4-201ENST00000583262 1652 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms