Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIRPB1O00241 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.19■□□□□ 0.5
SIRPB1O00241 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SIRPB1O00241 AC079089.2-201ENST00000531211 1277 ntBASIC18.19■□□□□ 0.5
SIRPB1O00241 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SIRPB1O00241 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.19■□□□□ 0.5
SIRPB1O00241 AC011298.3-201ENST00000615796 283 ntBASIC18.19■□□□□ 0.5
SIRPB1O00241 AC136469.2-201ENST00000623944 1028 ntBASIC18.19■□□□□ 0.5
SIRPB1O00241 AC068587.7-201ENST00000641602 218 ntBASIC18.19■□□□□ 0.5
SIRPB1O00241 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.19■□□□□ 0.5
SIRPB1O00241 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SIRPB1O00241 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIRPB1O00241 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SIRPB1O00241 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIRPB1O00241 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.18■□□□□ 0.5
SIRPB1O00241 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.18■□□□□ 0.5
SIRPB1O00241 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SIRPB1O00241 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIRPB1O00241 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.17■□□□□ 0.5
SIRPB1O00241 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SIRPB1O00241 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SIRPB1O00241 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.17■□□□□ 0.5
SIRPB1O00241 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SIRPB1O00241 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.17■□□□□ 0.5
SIRPB1O00241 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.17■□□□□ 0.5
SIRPB1O00241 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIRPB1O00241 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.16■□□□□ 0.5
SIRPB1O00241 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SIRPB1O00241 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 OR7E47P-201ENST00000546390 1422 ntBASIC18.16■□□□□ 0.5
SIRPB1O00241 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.16■□□□□ 0.5
SIRPB1O00241 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SIRPB1O00241 SLC47A1P1-202ENST00000449666 945 ntBASIC18.16■□□□□ 0.5
SIRPB1O00241 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SIRPB1O00241 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.16■□□□□ 0.5
SIRPB1O00241 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIRPB1O00241 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
SIRPB1O00241 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.15■□□□□ 0.5
SIRPB1O00241 FAM99A-202ENST00000538190 1989 ntBASIC18.15■□□□□ 0.5
SIRPB1O00241 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIRPB1O00241 UNC93B3-201ENST00000308076 687 ntBASIC18.15■□□□□ 0.5
SIRPB1O00241 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIRPB1O00241 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIRPB1O00241 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.15■□□□□ 0.5
SIRPB1O00241 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIRPB1O00241 AC010141.3-201ENST00000456659 717 ntBASIC18.15■□□□□ 0.5
SIRPB1O00241 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.15■□□□□ 0.5
SIRPB1O00241 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.15■□□□□ 0.5
SIRPB1O00241 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.15■□□□□ 0.5
SIRPB1O00241 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SIRPB1O00241 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIRPB1O00241 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SIRPB1O00241 AC008406.3-201ENST00000620001 1374 ntBASIC18.15■□□□□ 0.5
SIRPB1O00241 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIRPB1O00241 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIRPB1O00241 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SIRPB1O00241 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SIRPB1O00241 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SIRPB1O00241 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.14■□□□□ 0.49
SIRPB1O00241 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.14■□□□□ 0.49
SIRPB1O00241 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIRPB1O00241 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SIRPB1O00241 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIRPB1O00241 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.14■□□□□ 0.49
SIRPB1O00241 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIRPB1O00241 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIRPB1O00241 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIRPB1O00241 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIRPB1O00241 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIRPB1O00241 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.14■□□□□ 0.49
SIRPB1O00241 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms