Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.45■■□□□ 1.02
H3BM21 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.45■■□□□ 1.02
H3BM21 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
H3BM21 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
H3BM21 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.44■■□□□ 1.02
H3BM21 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.44■■□□□ 1.02
H3BM21 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 AC016769.1-201ENST00000409132 1010 ntBASIC21.44■■□□□ 1.02
H3BM21 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.44■■□□□ 1.02
H3BM21 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 SMUG1P1-201ENST00000590640 811 ntBASIC21.44■■□□□ 1.02
H3BM21 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
H3BM21 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H3BM21 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
H3BM21 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H3BM21 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
H3BM21 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
H3BM21 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H3BM21 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H3BM21 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.43■■□□□ 1.02
H3BM21 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.43■■□□□ 1.02
H3BM21 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.43■■□□□ 1.02
H3BM21 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
H3BM21 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.43■■□□□ 1.02
H3BM21 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H3BM21 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.43■■□□□ 1.02
H3BM21 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.43■■□□□ 1.02
H3BM21 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3BM21 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
H3BM21 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.42■■□□□ 1.02
H3BM21 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3BM21 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
H3BM21 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3BM21 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.42■■□□□ 1.02
H3BM21 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.42■■□□□ 1.02
H3BM21 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.42■■□□□ 1.02
H3BM21 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3BM21 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.42■■□□□ 1.02
H3BM21 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.42■■□□□ 1.02
H3BM21 AC137761.2-201ENST00000561729 223 ntBASIC21.42■■□□□ 1.02
H3BM21 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
H3BM21 AC145350.3-201ENST00000569033 163 ntBASIC21.42■■□□□ 1.02
H3BM21 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3BM21 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.42■■□□□ 1.02
H3BM21 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.42■■□□□ 1.02
H3BM21 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3BM21 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
H3BM21 ESRRAP2-201ENST00000418437 1549 ntBASIC21.41■■□□□ 1.02
H3BM21 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.41■■□□□ 1.02
H3BM21 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.41■■□□□ 1.02
H3BM21 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.41■■□□□ 1.02
H3BM21 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.41■■□□□ 1.02
H3BM21 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.41■■□□□ 1.02
H3BM21 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
H3BM21 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
H3BM21 AC087742.1-201ENST00000575880 1738 ntBASIC21.41■■□□□ 1.02
H3BM21 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
H3BM21 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.4■■□□□ 1.02
H3BM21 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
H3BM21 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
H3BM21 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
H3BM21 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H3BM21 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.39■■□□□ 1.02
H3BM21 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
H3BM21 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.39■■□□□ 1.02
H3BM21 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.39■■□□□ 1.02
H3BM21 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
H3BM21 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
H3BM21 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.39■■□□□ 1.01
H3BM21 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
H3BM21 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.39■■□□□ 1.01
H3BM21 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
H3BM21 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
H3BM21 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
H3BM21 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.39■■□□□ 1.01
H3BM21 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
H3BM21 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
H3BM21 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
H3BM21 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
H3BM21 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
H3BM21 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H3BM21 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H3BM21 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.38■■□□□ 1.01
H3BM21 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
H3BM21 KRT19P1-201ENST00000405746 1186 ntBASIC21.38■■□□□ 1.01
H3BM21 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.38■■□□□ 1.01
H3BM21 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.38■■□□□ 1.01
H3BM21 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H3BM21 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.38■■□□□ 1.01
H3BM21 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H3BM21 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.38■■□□□ 1.01
H3BM21 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms