Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 SNORA78-201ENST00000459373 127 ntBASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 FAM197Y4-202ENST00000622692 608 ntBASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM88BA6NKF7 AC055733.4-201ENST00000638462 1354 ntBASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
TMEM88BA6NKF7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TMEM88BA6NKF7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
TMEM88BA6NKF7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.46■■□□□ 1.67
TMEM88BA6NKF7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
TMEM88BA6NKF7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.46■■□□□ 1.67
TMEM88BA6NKF7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.46■■□□□ 1.67
TMEM88BA6NKF7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TMEM88BA6NKF7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.45■■□□□ 1.67
TMEM88BA6NKF7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
TMEM88BA6NKF7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.45■■□□□ 1.67
TMEM88BA6NKF7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TMEM88BA6NKF7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.45■■□□□ 1.66
TMEM88BA6NKF7 Z99916.2-201ENST00000604037 246 ntBASIC25.45■■□□□ 1.66
TMEM88BA6NKF7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.45■■□□□ 1.66
TMEM88BA6NKF7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.44■■□□□ 1.66
TMEM88BA6NKF7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 RPPH1-201ENST00000516869 333 ntBASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM88BA6NKF7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TMEM88BA6NKF7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms