Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3BA6NDS4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3BA6NDS4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3BA6NDS4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3BA6NDS4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.94■■□□□ 1.1
TBC1D3BA6NDS4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3BA6NDS4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3BA6NDS4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 MFSD11-216ENST00000590393 1141 ntBASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 AP001160.3-201ENST00000601484 763 ntBASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3BA6NDS4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 AC104771.1-201ENST00000603335 964 ntBASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 AL109923.1-201ENST00000618799 583 ntBASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3BA6NDS4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 MIR663A-201ENST00000385250 93 ntBASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 UBE2DNL-204ENST00000602536 740 ntBASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3BA6NDS4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 LINC00526-201ENST00000581067 1875 ntBASIC21.9■■□□□ 1.1
TBC1D3BA6NDS4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TBC1D3BA6NDS4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 NCF1B-203ENST00000435988 1254 ntBASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 AL034346.1-201ENST00000568244 1277 ntBASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TBC1D3BA6NDS4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TBC1D3BA6NDS4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 AC093323.1-202ENST00000635031 2045 ntBASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 GPX1P1-201ENST00000388829 606 ntBASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.87■■□□□ 1.09
TBC1D3BA6NDS4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms