Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SH3PXD2BA1X283 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3PXD2BA1X283 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 AC010542.4-201ENST00000563151 1910 ntBASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3PXD2BA1X283 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 AC005229.4-201ENST00000610085 2198 ntBASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH3PXD2BA1X283 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SH3PXD2BA1X283 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 TSPY9P-201ENST00000440215 945 ntBASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 TSPY11P-201ENST00000442607 1045 ntBASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 AC131212.1-201ENST00000613771 668 ntBASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 FAM99A-202ENST00000538190 1989 ntBASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.02■□□□□ 0.8
SH3PXD2BA1X283 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.02■□□□□ 0.79
SH3PXD2BA1X283 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SH3PXD2BA1X283 AC004687.1-201ENST00000579003 1625 ntBASIC20.02■□□□□ 0.79
SH3PXD2BA1X283 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.01■□□□□ 0.79
SH3PXD2BA1X283 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SH3PXD2BA1X283 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3PXD2BA1X283 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms