Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 AL034346.1-201ENST00000568244 1277 ntBASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-4A0A1B0GX49 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TRBV6-4A0A1B0GX49 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-4A0A1B0GX49 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-4A0A1B0GX49 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 SLC47A1P1-202ENST00000449666 945 ntBASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-4A0A1B0GX49 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 BX842568.3-201ENST00000418104 571 ntBASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC010542.4-201ENST00000563151 1910 ntBASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-4A0A1B0GX49 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-4A0A1B0GX49 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC008406.3-201ENST00000620001 1374 ntBASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 UNC93B3-201ENST00000308076 687 ntBASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC244015.2-201ENST00000616358 1861 ntBASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-4A0A1B0GX49 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms