Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
IGHV3-43A0A0B4J1X8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IGHV3-43A0A0B4J1X8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IGHV3-43A0A0B4J1X8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV3-43A0A0B4J1X8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AC079089.2-201ENST00000531211 1277 ntBASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 FAM99A-202ENST00000538190 1989 ntBASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV3-43A0A0B4J1X8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AC010542.4-201ENST00000563151 1910 ntBASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AL138724.1-201ENST00000606771 1088 ntBASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV3-43A0A0B4J1X8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.83■□□□□ 0.45
IGHV3-43A0A0B4J1X8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IGHV3-43A0A0B4J1X8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
IGHV3-43A0A0B4J1X8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
IGHV3-43A0A0B4J1X8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
IGHV3-43A0A0B4J1X8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.83■□□□□ 0.45
IGHV3-43A0A0B4J1X8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SLC47A1P1-202ENST00000449666 945 ntBASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC087239.1-201ENST00000622671 572 ntBASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC136469.2-201ENST00000623944 1028 ntBASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC011298.3-201ENST00000615796 283 ntBASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 OR7E47P-201ENST00000546390 1422 ntBASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 UNC93B3-201ENST00000308076 687 ntBASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC010141.3-201ENST00000456659 717 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms