Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC12.6□□□□□ -0.39
SLC1A1P43005 UGT1A12P-201ENST00000447084 853 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC12.6□□□□□ -0.39
SLC1A1P43005 AL359692.1-201ENST00000451069 265 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.6□□□□□ -0.39
SLC1A1P43005 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC12.6□□□□□ -0.39
SLC1A1P43005 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 ALG1L15P-201ENST00000482834 794 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 KIAA0930-213ENST00000492273 403 ntTSL 3 BASIC12.6□□□□□ -0.39
SLC1A1P43005 GNGT2-202ENST00000503070 522 ntTSL 3 BASIC12.6□□□□□ -0.39
SLC1A1P43005 AC092612.1-201ENST00000514501 998 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 HNRNPA1P12-201ENST00000515379 961 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 AC103706.1-201ENST00000561761 679 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC12.6□□□□□ -0.39
SLC1A1P43005 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 HLA-DQA2-210ENST00000374940 1524 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SLC1A1P43005 IMPDH1P11-201ENST00000567885 1504 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SLC1A1P43005 ZBTB14-208ENST00000615385 3350 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 KCNAB2-204ENST00000378083 4142 ntTSL 2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC12.6□□□□□ -0.39
SLC1A1P43005 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 MPP2-203ENST00000461854 3462 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 BTG2-201ENST00000290551 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 PCDHA9-201ENST00000378122 6900 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC12.6□□□□□ -0.39
SLC1A1P43005 FER1L6-AS2-201ENST00000520031 1746 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 PIFO-202ENST00000369738 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 SLC18A1-202ENST00000276373 2753 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 RIC3-203ENST00000343202 2929 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 CASQ2-201ENST00000261448 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 TMEM139-204ENST00000409541 1907 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 CNDP2-202ENST00000324301 2349 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AC243772.2-201ENST00000428289 3543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 HRH2-201ENST00000231683 1080 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SLC1A1P43005 RPL36AL-201ENST00000298289 746 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC12.59□□□□□ -0.39
SLC1A1P43005 ASS1P1-201ENST00000402854 1237 ntBASIC12.59□□□□□ -0.39
SLC1A1P43005 RNA5SP407-201ENST00000410275 110 ntBASIC12.59□□□□□ -0.39
SLC1A1P43005 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 LHFPL3-AS1-206ENST00000449764 1196 ntTSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 RN7SL578P-201ENST00000477781 283 ntBASIC12.59□□□□□ -0.39
SLC1A1P43005 AC090821.1-201ENST00000517380 1041 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AC125494.1-202ENST00000586338 723 ntTSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC12.59□□□□□ -0.39
SLC1A1P43005 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC12.59□□□□□ -0.39
SLC1A1P43005 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 AL512324.1-201ENST00000618885 217 ntBASIC12.59□□□□□ -0.39
SLC1A1P43005 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SLC1A1P43005 SLC8A3-201ENST00000216568 2916 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 RNF170-203ENST00000319104 1866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 DCBLD2-202ENST00000326857 3959 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 ZNF610-201ENST00000321287 2150 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC12.59□□□□□ -0.39
SLC1A1P43005 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SLC1A1P43005 AFG3L1P-214ENST00000454997 3327 ntTSL 2 BASIC12.59□□□□□ -0.39
SLC1A1P43005 PWP1-201ENST00000412830 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SLC1A1P43005 OR10G3-203ENST00000641185 2640 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
SLC1A1P43005 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SLC1A1P43005 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.39
SLC1A1P43005 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms