Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 AC091305.1-201ENST00000479476 895 ntBASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 MIR3181-201ENST00000578512 73 ntBASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX49Q9Y6V7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 AC080038.3-201ENST00000623346 1952 ntBASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
DDX49Q9Y6V7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 AC099791.1-201ENST00000416440 715 ntBASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 AC092171.4-201ENST00000609130 632 ntBASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 AC092666.2-201ENST00000613287 246 ntBASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX49Q9Y6V7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 AC011298.3-201ENST00000615796 283 ntBASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.76■■□□□ 1.71
DDX49Q9Y6V7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 AC009086.3-201ENST00000623486 1008 ntBASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX49Q9Y6V7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 RASA4CP-201ENST00000424092 1398 ntBASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
DDX49Q9Y6V7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 AC026310.3-201ENST00000625186 2373 ntBASIC25.73■■□□□ 1.71
DDX49Q9Y6V7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX49Q9Y6V7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX49Q9Y6V7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
DDX49Q9Y6V7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
DDX49Q9Y6V7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.71■■□□□ 1.71
DDX49Q9Y6V7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX49Q9Y6V7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.71■■□□□ 1.71
DDX49Q9Y6V7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 1317.5 ms