Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3AQ9Y6K1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3AQ9Y6K1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 AC068473.5-201ENST00000616428 2072 ntBASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3AQ9Y6K1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 AP004607.7-201ENST00000527152 1677 ntBASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 TERF1P2-201ENST00000583350 1212 ntBASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 MIR5787-201ENST00000611784 55 ntBASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3AQ9Y6K1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 AC034268.1-201ENST00000441047 882 ntBASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3AQ9Y6K1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNMT3AQ9Y6K1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
DNMT3AQ9Y6K1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.14■□□□□ 0.98
DNMT3AQ9Y6K1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
DNMT3AQ9Y6K1 AC087623.3-201ENST00000607047 1098 ntBASIC21.14■□□□□ 0.97
DNMT3AQ9Y6K1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.14■□□□□ 0.97
DNMT3AQ9Y6K1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DNMT3AQ9Y6K1 AC005224.4-201ENST00000583262 1652 ntBASIC21.14■□□□□ 0.97
DNMT3AQ9Y6K1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
DNMT3AQ9Y6K1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3AQ9Y6K1 CCDC92B-201ENST00000575506 885 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms