Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB3Q9Y5G1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 AL138724.1-201ENST00000606771 1088 ntBASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 AL355001.2-201ENST00000620617 1191 ntBASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB3Q9Y5G1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 pRNA.6-201ENST00000610482 90 ntBASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 pRNA.5-201ENST00000612139 90 ntBASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 pRNA.11-201ENST00000618423 90 ntBASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 pRNA.13-201ENST00000619112 90 ntBASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 SYT6-210ENST00000641643 1587 ntBASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGB3Q9Y5G1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 SUDS3P1-201ENST00000505831 966 ntBASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 AC133637.1-201ENST00000624115 1537 ntBASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB3Q9Y5G1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGB3Q9Y5G1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 AC024257.2-201ENST00000549699 147 ntBASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 AC142381.2-201ENST00000566120 298 ntBASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 AL031432.3-201ENST00000607698 485 ntBASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 AL024507.2-201ENST00000606070 2574 ntBASIC20.39■□□□□ 0.85
PCDHGB3Q9Y5G1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 MIR935-201ENST00000401179 91 ntBASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB3Q9Y5G1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB3Q9Y5G1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms