Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP004607.7-201ENST00000527152 1677 ntBASIC22.68■■□□□ 1.22
YIPF1Q9Y548 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
YIPF1Q9Y548 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.68■■□□□ 1.22
YIPF1Q9Y548 AC011767.1-201ENST00000617410 1153 ntBASIC22.68■■□□□ 1.22
YIPF1Q9Y548 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
YIPF1Q9Y548 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
YIPF1Q9Y548 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 LINC00526-201ENST00000581067 1875 ntBASIC22.67■■□□□ 1.22
YIPF1Q9Y548 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
YIPF1Q9Y548 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.66■■□□□ 1.22
YIPF1Q9Y548 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.66■■□□□ 1.22
YIPF1Q9Y548 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 MFSD11-216ENST00000590393 1141 ntBASIC22.65■■□□□ 1.22
YIPF1Q9Y548 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
YIPF1Q9Y548 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
YIPF1Q9Y548 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
YIPF1Q9Y548 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
YIPF1Q9Y548 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
YIPF1Q9Y548 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
YIPF1Q9Y548 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 CROCCP5-201ENST00000436658 830 ntBASIC22.63■■□□□ 1.21
YIPF1Q9Y548 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.63■■□□□ 1.21
YIPF1Q9Y548 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
YIPF1Q9Y548 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 AC006970.2-201ENST00000450065 779 ntBASIC22.62■■□□□ 1.21
YIPF1Q9Y548 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 AL034346.1-201ENST00000568244 1277 ntBASIC22.62■■□□□ 1.21
YIPF1Q9Y548 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 AP001160.3-201ENST00000601484 763 ntBASIC22.62■■□□□ 1.21
YIPF1Q9Y548 UBE2DNL-204ENST00000602536 740 ntBASIC22.62■■□□□ 1.21
YIPF1Q9Y548 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.62■■□□□ 1.21
YIPF1Q9Y548 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
YIPF1Q9Y548 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms