Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.31■□□□□ 0.68
EXOSC1Q9Y3B2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXOSC1Q9Y3B2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXOSC1Q9Y3B2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.31■□□□□ 0.68
EXOSC1Q9Y3B2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXOSC1Q9Y3B2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.31■□□□□ 0.68
EXOSC1Q9Y3B2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXOSC1Q9Y3B2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 AF106564.1-201ENST00000607058 2553 ntBASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 MIR6722-201ENST00000617286 78 ntBASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
EXOSC1Q9Y3B2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EXOSC1Q9Y3B2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
EXOSC1Q9Y3B2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 AC010980.1-201ENST00000587192 1142 ntBASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EXOSC1Q9Y3B2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EXOSC1Q9Y3B2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
EXOSC1Q9Y3B2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EXOSC1Q9Y3B2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
EXOSC1Q9Y3B2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
EXOSC1Q9Y3B2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.27■□□□□ 0.67
EXOSC1Q9Y3B2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.26■□□□□ 0.67
EXOSC1Q9Y3B2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXOSC1Q9Y3B2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms