Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 AC242852.2-201ENST00000615738 1807 ntBASIC20.88■□□□□ 0.93
CUEDC1Q9NWM3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CUEDC1Q9NWM3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CUEDC1Q9NWM3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.87■□□□□ 0.93
CUEDC1Q9NWM3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.87■□□□□ 0.93
CUEDC1Q9NWM3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CUEDC1Q9NWM3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CUEDC1Q9NWM3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CUEDC1Q9NWM3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 AC079834.2-201ENST00000609776 1949 ntBASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 CLDN5-201ENST00000403084 2357 ntBASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CUEDC1Q9NWM3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 MIR572-201ENST00000384983 95 ntBASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 RARRES2P11-201ENST00000635158 484 ntBASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 EP400NL-214ENST00000641289 2402 ntBASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CUEDC1Q9NWM3 ECEL1P1-201ENST00000373592 1742 ntBASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 AC090192.1-201ENST00000517740 490 ntBASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CUEDC1Q9NWM3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 SMUG1P1-201ENST00000590640 811 ntBASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 AC105233.4-201ENST00000642045 216 ntBASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 OR7E47P-201ENST00000546390 1422 ntBASIC20.83■□□□□ 0.93
CUEDC1Q9NWM3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.83■□□□□ 0.92
CUEDC1Q9NWM3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CUEDC1Q9NWM3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CUEDC1Q9NWM3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CUEDC1Q9NWM3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
CUEDC1Q9NWM3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.82■□□□□ 0.92
CUEDC1Q9NWM3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms