Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
POLR1BQ9H9Y6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 LINC00526-201ENST00000581067 1875 ntBASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 AC137767.1-201ENST00000602918 1920 ntBASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR1BQ9H9Y6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 AC080038.1-201ENST00000611274 1154 ntBASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 AC105233.4-201ENST00000642045 216 ntBASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.24■□□□□ 0.99
POLR1BQ9H9Y6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 FP325331.1-202ENST00000623531 1380 ntBASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 AC007375.3-201ENST00000600936 2314 ntBASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR1BQ9H9Y6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR1BQ9H9Y6 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR1BQ9H9Y6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
POLR1BQ9H9Y6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 AC006015.1-201ENST00000429970 570 ntBASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 DUX4L4-201ENST00000566884 1269 ntBASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 AC127496.7-201ENST00000625110 1798 ntBASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms