Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 AL033527.3-201ENST00000566366 1196 ntBASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 AC012354.3-201ENST00000623734 483 ntBASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDC42EP4Q9H3Q1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 AC026471.6-201ENST00000622954 1905 ntBASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 C17orf82-201ENST00000623772 1530 ntBASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 AL157384.1-201ENST00000445995 2473 ntBASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CDC42EP4Q9H3Q1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42EP4Q9H3Q1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42EP4Q9H3Q1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 BX664725.1-201ENST00000438252 379 ntBASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42EP4Q9H3Q1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDC42EP4Q9H3Q1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 AL499627.2-201ENST00000606283 725 ntBASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42EP4Q9H3Q1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42EP4Q9H3Q1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42EP4Q9H3Q1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms