Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 AP005435.1-201ENST00000529293 1178 ntBASIC20.02■□□□□ 0.8
UBQLN3Q9H347 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
UBQLN3Q9H347 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBQLN3Q9H347 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBQLN3Q9H347 TSPY26P-201ENST00000476365 1326 ntBASIC20.02■□□□□ 0.79
UBQLN3Q9H347 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
UBQLN3Q9H347 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20■□□□□ 0.79
UBQLN3Q9H347 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UBQLN3Q9H347 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
UBQLN3Q9H347 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20■□□□□ 0.79
UBQLN3Q9H347 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN3Q9H347 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UBQLN3Q9H347 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 C11orf96-202ENST00000528572 1834 ntBASIC19.99■□□□□ 0.79
UBQLN3Q9H347 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN3Q9H347 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN3Q9H347 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 RARRES2P6-201ENST00000567333 442 ntBASIC19.97■□□□□ 0.79
UBQLN3Q9H347 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN3Q9H347 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 AC026271.2-201ENST00000428091 497 ntBASIC19.96■□□□□ 0.79
UBQLN3Q9H347 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN3Q9H347 AC007375.3-201ENST00000600936 2314 ntBASIC19.96■□□□□ 0.79
UBQLN3Q9H347 MIR572-201ENST00000384983 95 ntBASIC19.95■□□□□ 0.78
UBQLN3Q9H347 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 AL031602.1-201ENST00000633169 911 ntBASIC19.95■□□□□ 0.78
UBQLN3Q9H347 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms