Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-3Q9BYR4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 LINC00526-201ENST00000581067 1875 ntBASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 DBI-210ENST00000542275 757 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
KRTAP4-3Q9BYR4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
KRTAP4-3Q9BYR4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms