Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 pRNA.6-201ENST00000610482 90 ntBASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 pRNA.5-201ENST00000612139 90 ntBASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 AC092666.2-201ENST00000613287 246 ntBASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 pRNA.11-201ENST00000618423 90 ntBASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 pRNA.13-201ENST00000619112 90 ntBASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF4Q9BUZ4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 AC097381.1-201ENST00000429019 1296 ntBASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 C11orf96-202ENST00000528572 1834 ntBASIC19.21■□□□□ 0.67
TRAF4Q9BUZ4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 AC104564.3-201ENST00000582367 638 ntBASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF4Q9BUZ4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF4Q9BUZ4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 AC026310.3-201ENST00000625186 2373 ntBASIC19.18■□□□□ 0.66
TRAF4Q9BUZ4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAF4Q9BUZ4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF4Q9BUZ4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
TRAF4Q9BUZ4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAF4Q9BUZ4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF4Q9BUZ4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms