Protein–RNA interactions for Protein: Q99941

ATF6B, Cyclic AMP-dependent transcription factor ATF-6 beta, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6BQ99941 AC241585.3-202ENST00000628937 1088 ntBASIC19.3■□□□□ 0.68
ATF6BQ99941 AC245100.8-202ENST00000629247 1058 ntBASIC19.3■□□□□ 0.68
ATF6BQ99941 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF6BQ99941 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF6BQ99941 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF6BQ99941 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ATF6BQ99941 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF6BQ99941 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 MIR3621-201ENST00000580529 85 ntBASIC19.29■□□□□ 0.68
ATF6BQ99941 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF6BQ99941 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF6BQ99941 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF6BQ99941 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF6BQ99941 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ATF6BQ99941 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF6BQ99941 AC004687.1-201ENST00000579003 1625 ntBASIC19.29■□□□□ 0.68
ATF6BQ99941 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATF6BQ99941 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF6BQ99941 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF6BQ99941 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF6BQ99941 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF6BQ99941 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
ATF6BQ99941 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF6BQ99941 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATF6BQ99941 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.27■□□□□ 0.68
ATF6BQ99941 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF6BQ99941 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF6BQ99941 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATF6BQ99941 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATF6BQ99941 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ATF6BQ99941 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATF6BQ99941 AL356441.2-201ENST00000443009 864 ntBASIC19.26■□□□□ 0.67
ATF6BQ99941 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.26■□□□□ 0.67
ATF6BQ99941 AL499627.2-201ENST00000606283 725 ntBASIC19.26■□□□□ 0.67
ATF6BQ99941 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.26■□□□□ 0.67
ATF6BQ99941 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATF6BQ99941 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.26■□□□□ 0.67
ATF6BQ99941 LINC01960-201ENST00000563759 1884 ntBASIC19.26■□□□□ 0.67
ATF6BQ99941 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF6BQ99941 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.25■□□□□ 0.67
ATF6BQ99941 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF6BQ99941 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.25■□□□□ 0.67
ATF6BQ99941 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF6BQ99941 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF6BQ99941 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ATF6BQ99941 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATF6BQ99941 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF6BQ99941 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF6BQ99941 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF6BQ99941 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF6BQ99941 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
ATF6BQ99941 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF6BQ99941 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.24■□□□□ 0.67
ATF6BQ99941 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.24■□□□□ 0.67
ATF6BQ99941 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ATF6BQ99941 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF6BQ99941 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.24■□□□□ 0.67
ATF6BQ99941 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ATF6BQ99941 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF6BQ99941 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ATF6BQ99941 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.24■□□□□ 0.67
ATF6BQ99941 AC092667.1-201ENST00000434301 2586 ntBASIC19.24■□□□□ 0.67
ATF6BQ99941 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.24■□□□□ 0.67
ATF6BQ99941 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF6BQ99941 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms