Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 AC133561.1-201ENST00000568600 2415 ntBASIC17.59■□□□□ 0.41
ZNF48Q96MX3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
ZNF48Q96MX3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF48Q96MX3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF48Q96MX3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF48Q96MX3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 HLA-L-209ENST00000420110 1011 ntBASIC17.57■□□□□ 0.4
ZNF48Q96MX3 CDCA4P2-201ENST00000441182 718 ntBASIC17.57■□□□□ 0.4
ZNF48Q96MX3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 RAP2CP1-201ENST00000605103 478 ntBASIC17.57■□□□□ 0.4
ZNF48Q96MX3 AC073111.5-205ENST00000641717 521 ntBASIC17.57■□□□□ 0.4
ZNF48Q96MX3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 OXCT2P1-201ENST00000447263 1535 ntBASIC17.57■□□□□ 0.4
ZNF48Q96MX3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF48Q96MX3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF48Q96MX3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF48Q96MX3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF48Q96MX3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF48Q96MX3 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.53■□□□□ 0.4
ZNF48Q96MX3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms