Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
CDHR1Q96JP9 AC055733.4-201ENST00000638462 1354 ntBASIC24.3■■□□□ 1.48
CDHR1Q96JP9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 AC137761.2-201ENST00000561729 223 ntBASIC24.3■■□□□ 1.48
CDHR1Q96JP9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 AC145350.3-201ENST00000569033 163 ntBASIC24.3■■□□□ 1.48
CDHR1Q96JP9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CDHR1Q96JP9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDHR1Q96JP9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 AC016769.1-201ENST00000409132 1010 ntBASIC24.28■■□□□ 1.48
CDHR1Q96JP9 AC006015.1-201ENST00000429970 570 ntBASIC24.28■■□□□ 1.48
CDHR1Q96JP9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDHR1Q96JP9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 AC004911.1-201ENST00000416316 871 ntBASIC24.27■■□□□ 1.48
CDHR1Q96JP9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 RARRES2P11-201ENST00000635158 484 ntBASIC24.27■■□□□ 1.48
CDHR1Q96JP9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDHR1Q96JP9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 ESRRAP2-201ENST00000418437 1549 ntBASIC24.26■■□□□ 1.47
CDHR1Q96JP9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.26■■□□□ 1.47
CDHR1Q96JP9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR1Q96JP9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CDHR1Q96JP9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR1Q96JP9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.25■■□□□ 1.47
CDHR1Q96JP9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR1Q96JP9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CDHR1Q96JP9 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.25■■□□□ 1.47
CDHR1Q96JP9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CDHR1Q96JP9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.24■■□□□ 1.47
CDHR1Q96JP9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDHR1Q96JP9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDHR1Q96JP9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms