Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 AC009299.2-201ENST00000482477 511 ntBASIC18.68■□□□□ 0.58
CPNE2Q96FN4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE2Q96FN4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 RARRES2P1-201ENST00000474487 481 ntBASIC18.67■□□□□ 0.58
CPNE2Q96FN4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 AL137060.1-201ENST00000618151 2648 ntBASIC18.67■□□□□ 0.58
CPNE2Q96FN4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE2Q96FN4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 FBXW4P1-201ENST00000426721 2239 ntBASIC18.66■□□□□ 0.58
CPNE2Q96FN4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE2Q96FN4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE2Q96FN4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPNE2Q96FN4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CPNE2Q96FN4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE2Q96FN4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE2Q96FN4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 AC068587.7-201ENST00000641602 218 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms