Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
RNF31Q96EP0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF31Q96EP0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF31Q96EP0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF31Q96EP0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF31Q96EP0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF31Q96EP0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF31Q96EP0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF31Q96EP0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF31Q96EP0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF31Q96EP0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF31Q96EP0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF31Q96EP0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF31Q96EP0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 SMUG1P1-201ENST00000590640 811 ntBASIC20.76■□□□□ 0.91
RNF31Q96EP0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF31Q96EP0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF31Q96EP0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 AC004854.2-201ENST00000608450 1441 ntBASIC20.76■□□□□ 0.91
RNF31Q96EP0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF31Q96EP0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF31Q96EP0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF31Q96EP0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF31Q96EP0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF31Q96EP0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF31Q96EP0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF31Q96EP0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF31Q96EP0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF31Q96EP0 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.75■□□□□ 0.91
RNF31Q96EP0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF31Q96EP0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF31Q96EP0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF31Q96EP0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF31Q96EP0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF31Q96EP0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RNF31Q96EP0 AC010141.3-201ENST00000456659 717 ntBASIC20.74■□□□□ 0.91
RNF31Q96EP0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF31Q96EP0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF31Q96EP0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF31Q96EP0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF31Q96EP0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF31Q96EP0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RNF31Q96EP0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF31Q96EP0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF31Q96EP0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF31Q96EP0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF31Q96EP0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF31Q96EP0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF31Q96EP0 DUSP8P3-201ENST00000399571 1760 ntBASIC20.72■□□□□ 0.91
RNF31Q96EP0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF31Q96EP0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF31Q96EP0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF31Q96EP0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 AC137761.2-201ENST00000561729 223 ntBASIC20.71■□□□□ 0.91
RNF31Q96EP0 AC145350.3-201ENST00000569033 163 ntBASIC20.71■□□□□ 0.91
RNF31Q96EP0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF31Q96EP0 BX005040.4-201ENST00000637145 1518 ntBASIC20.71■□□□□ 0.91
RNF31Q96EP0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms