Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SYNPOQ8N3V7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 AC005181.1-201ENST00000604782 1256 ntBASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 AL050303.2-201ENST00000619798 666 ntBASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SYNPOQ8N3V7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SYNPOQ8N3V7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.02■■□□□ 1.12
SYNPOQ8N3V7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.02■■□□□ 1.12
SYNPOQ8N3V7 SLC7A5P2-201ENST00000553010 536 ntBASIC22.02■■□□□ 1.12
SYNPOQ8N3V7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.02■■□□□ 1.12
SYNPOQ8N3V7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
SYNPOQ8N3V7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.02■■□□□ 1.11
SYNPOQ8N3V7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.11
SYNPOQ8N3V7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 KRT18P6-201ENST00000555540 1265 ntBASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SYNPOQ8N3V7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYNPOQ8N3V7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYNPOQ8N3V7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYNPOQ8N3V7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SYNPOQ8N3V7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYNPOQ8N3V7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 SLC29A4P1-201ENST00000398760 971 ntBASIC22■■□□□ 1.11
SYNPOQ8N3V7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22■■□□□ 1.11
SYNPOQ8N3V7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SYNPOQ8N3V7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYNPOQ8N3V7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 AC004812.2-201ENST00000611079 2094 ntBASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 UBE2DNL-204ENST00000602536 740 ntBASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 MYCNOS-205ENST00000641950 531 ntBASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 DUSP8P3-201ENST00000399571 1760 ntBASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYNPOQ8N3V7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 GUSBP6-202ENST00000438529 1198 ntBASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 AP001160.3-201ENST00000601484 763 ntBASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.98■■□□□ 1.11
SYNPOQ8N3V7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms