Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC116Q8IYX3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 AC008764.7-201ENST00000593779 1081 ntBASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC116Q8IYX3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 AC126544.1-201ENST00000580842 1059 ntBASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 OR7E47P-201ENST00000546390 1422 ntBASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC116Q8IYX3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC116Q8IYX3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC116Q8IYX3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC116Q8IYX3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CCDC116Q8IYX3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC116Q8IYX3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.84
CCDC116Q8IYX3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC116Q8IYX3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC116Q8IYX3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC116Q8IYX3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 EDA-201ENST00000338901 1233 ntBASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 AC099791.1-201ENST00000416440 715 ntBASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 AL139246.5-201ENST00000606645 996 ntBASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 AL355001.2-201ENST00000620617 1191 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms