Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 AP004607.7-201ENST00000527152 1677 ntBASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 AC009237.3-201ENST00000393279 1427 ntBASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 KRT18P14-201ENST00000534205 1250 ntBASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 AL034346.1-201ENST00000568244 1277 ntBASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM4Q86VH4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4L2-201ENST00000561772 1275 ntBASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4L6-201ENST00000626483 1275 ntBASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4L1-201ENST00000627662 1275 ntBASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4L8-201ENST00000629013 1275 ntBASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4L3-201ENST00000630187 1275 ntBASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4L7-201ENST00000630678 1275 ntBASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DUX4L5-201ENST00000630834 1275 ntBASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LRRTM4Q86VH4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 AC068473.5-201ENST00000616428 2072 ntBASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM4Q86VH4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 AC005224.4-201ENST00000583262 1652 ntBASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM4Q86VH4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 AL162430.1-201ENST00000480705 870 ntBASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms