Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSMD2Q7Z408 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSMD2Q7Z408 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CSMD2Q7Z408 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CSMD2Q7Z408 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSMD2Q7Z408 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD2Q7Z408 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CSMD2Q7Z408 AC068338.2-201ENST00000563278 1430 ntBASIC18.46■□□□□ 0.55
CSMD2Q7Z408 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CSMD2Q7Z408 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.46■□□□□ 0.55
CSMD2Q7Z408 AC093787.1-201ENST00000450396 207 ntBASIC18.46■□□□□ 0.55
CSMD2Q7Z408 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD2Q7Z408 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD2Q7Z408 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.46■□□□□ 0.55
CSMD2Q7Z408 AC010536.3-201ENST00000620306 533 ntBASIC18.46■□□□□ 0.54
CSMD2Q7Z408 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CSMD2Q7Z408 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 AC007322.4-201ENST00000509611 723 ntBASIC18.45■□□□□ 0.54
CSMD2Q7Z408 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD2Q7Z408 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 AC026366.1-201ENST00000488803 879 ntBASIC18.44■□□□□ 0.54
CSMD2Q7Z408 DUSP8P4-201ENST00000399538 1761 ntBASIC18.44■□□□□ 0.54
CSMD2Q7Z408 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 AC142381.4-202ENST00000563973 229 ntBASIC18.44■□□□□ 0.54
CSMD2Q7Z408 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD2Q7Z408 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 FP325331.1-202ENST00000623531 1380 ntBASIC18.43■□□□□ 0.54
CSMD2Q7Z408 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 AL445228.2-201ENST00000605589 952 ntBASIC18.43■□□□□ 0.54
CSMD2Q7Z408 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CSMD2Q7Z408 AL353803.4-201ENST00000565882 1934 ntBASIC18.43■□□□□ 0.54
CSMD2Q7Z408 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 AL161729.1-201ENST00000604104 1402 ntBASIC18.42■□□□□ 0.54
CSMD2Q7Z408 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 AC005224.4-201ENST00000583262 1652 ntBASIC18.42■□□□□ 0.54
CSMD2Q7Z408 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.42■□□□□ 0.54
CSMD2Q7Z408 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 AC079630.1-202ENST00000618127 1840 ntBASIC18.41■□□□□ 0.54
CSMD2Q7Z408 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 AC013268.1-206ENST00000638368 961 ntBASIC18.41■□□□□ 0.54
CSMD2Q7Z408 AC112229.1-201ENST00000639295 961 ntBASIC18.41■□□□□ 0.54
CSMD2Q7Z408 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 UNC93B5-201ENST00000530315 699 ntBASIC18.41■□□□□ 0.54
CSMD2Q7Z408 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD2Q7Z408 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms