Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL6Q6ICC9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL6Q6ICC9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 AP004607.4-201ENST00000530158 1459 ntBASIC19.47■□□□□ 0.71
RTL6Q6ICC9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL6Q6ICC9 OXCT2P1-201ENST00000447263 1535 ntBASIC19.46■□□□□ 0.71
RTL6Q6ICC9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL6Q6ICC9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 DUSP8P3-201ENST00000399571 1760 ntBASIC19.45■□□□□ 0.7
RTL6Q6ICC9 AC004854.2-201ENST00000608450 1441 ntBASIC19.45■□□□□ 0.7
RTL6Q6ICC9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RTL6Q6ICC9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 ANOS2P-203ENST00000472227 1816 ntBASIC19.44■□□□□ 0.7
RTL6Q6ICC9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 AC006015.1-201ENST00000429970 570 ntBASIC19.44■□□□□ 0.7
RTL6Q6ICC9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL6Q6ICC9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 AL117328.2-201ENST00000624617 1940 ntBASIC19.43■□□□□ 0.7
RTL6Q6ICC9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL6Q6ICC9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms