Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 ZNRF2P3-201ENST00000424200 374 ntBASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 SMUG1P1-201ENST00000590640 811 ntBASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.05■□□□□ 0.96
CCSMST1Q4G0I0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 OR7E47P-201ENST00000546390 1422 ntBASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 MIR572-201ENST00000384983 95 ntBASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.04■□□□□ 0.96
CCSMST1Q4G0I0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 AC092053.2-201ENST00000640557 1818 ntBASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CCSMST1Q4G0I0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 AC105233.4-201ENST00000642045 216 ntBASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.02■□□□□ 0.96
CCSMST1Q4G0I0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.02■□□□□ 0.95
CCSMST1Q4G0I0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCSMST1Q4G0I0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CCSMST1Q4G0I0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSMST1Q4G0I0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 IRS3P-201ENST00000223076 1006 ntBASIC21■□□□□ 0.95
CCSMST1Q4G0I0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSMST1Q4G0I0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 MIR6084-201ENST00000622012 110 ntBASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSMST1Q4G0I0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms