Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 RPA135YPR010C 3612 nt3.19□□□□□ -1.9
RRP40Q08285 TGL1YKL140W 1647 nt3.19□□□□□ -1.9
RRP40Q08285 SMC3YJL074C 3693 nt3.19□□□□□ -1.9
RRP40Q08285 QRI7YDL104C 1224 nt3.19□□□□□ -1.9
RRP40Q08285 MTM1YGR257C 1101 nt3.19□□□□□ -1.9
RRP40Q08285 SFH5YJL145W 885 nt3.19□□□□□ -1.9
RRP40Q08285 SHH3YMR118C 591 nt3.19□□□□□ -1.9
RRP40Q08285 VPS27YNR006W 1869 nt3.19□□□□□ -1.9
RRP40Q08285 MSR1YHR091C 1932 nt3.19□□□□□ -1.9
RRP40Q08285 YNR063WYNR063W 1824 nt3.19□□□□□ -1.9
RRP40Q08285 NUP60YAR002W 1620 nt3.19□□□□□ -1.9
RRP40Q08285 YKL050CYKL050C 2769 nt3.18□□□□□ -1.9
RRP40Q08285 AGA1YNR044W 2178 nt3.18□□□□□ -1.9
RRP40Q08285 RPN2YIL075C 2838 nt3.18□□□□□ -1.9
RRP40Q08285 SDT1YGL224C 843 nt3.18□□□□□ -1.9
RRP40Q08285 GTF1YGR102C 552 nt3.18□□□□□ -1.9
RRP40Q08285 YIR040CYIR040C 333 nt3.18□□□□□ -1.9
RRP40Q08285 UBP12YJL197W 3765 nt3.18□□□□□ -1.9
RRP40Q08285 AKR1YDR264C 2295 nt3.18□□□□□ -1.9
RRP40Q08285 PRP3YDR473C 1410 nt3.18□□□□□ -1.9
RRP40Q08285 SRO9YCL037C 1305 nt3.18□□□□□ -1.9
RRP40Q08285 EXO5YBR163W 1758 nt3.17□□□□□ -1.9
RRP40Q08285 RAI1YGL246C 1164 nt3.17□□□□□ -1.9
RRP40Q08285 BCD1YHR040W 1101 nt3.17□□□□□ -1.9
RRP40Q08285 YET2YMR040W 483 nt3.17□□□□□ -1.9
RRP40Q08285 YMR122W-AYMR122W-A 255 nt3.17□□□□□ -1.9
RRP40Q08285 TMC1YOR052C 453 nt3.17□□□□□ -1.9
RRP40Q08285 YOR186WYOR186W 435 nt3.17□□□□□ -1.9
RRP40Q08285 SQS1YNL224C 2304 nt3.17□□□□□ -1.9
RRP40Q08285 ERG9YHR190W 1335 nt3.17□□□□□ -1.9
RRP40Q08285 PFK26YIL107C 2484 nt3.16□□□□□ -1.9
RRP40Q08285 ETP1YHL010C 1758 nt3.16□□□□□ -1.9
RRP40Q08285 LSM6YDR378C 261 nt3.16□□□□□ -1.9
RRP40Q08285 YJL028WYJL028W 336 nt3.16□□□□□ -1.9
RRP40Q08285 ENT3YJR125C 1227 nt3.16□□□□□ -1.9
RRP40Q08285 SSO2YMR183C 888 nt3.16□□□□□ -1.9
RRP40Q08285 GAT2YMR136W 1683 nt3.16□□□□□ -1.9
RRP40Q08285 PRS5YOL061W 1491 nt3.16□□□□□ -1.9
RRP40Q08285 YAK1YJL141C 2424 nt3.15□□□□□ -1.9
RRP40Q08285 FAP7YDL166C 594 nt3.15□□□□□ -1.91
RRP40Q08285 PCL9YDL179W 915 nt3.15□□□□□ -1.91
RRP40Q08285 ERJ5YFR041C 888 nt3.15□□□□□ -1.91
RRP40Q08285 YGL063C-AYGL063C-A 150 nt3.15□□□□□ -1.91
RRP40Q08285 ARD1YHR013C 717 nt3.15□□□□□ -1.91
RRP40Q08285 TPM1YNL079C 600 nt3.15□□□□□ -1.91
RRP40Q08285 YNL320WYNL320W 855 nt3.15□□□□□ -1.91
RRP40Q08285 RPC34YNR003C 954 nt3.15□□□□□ -1.91
RRP40Q08285 AIM39YOL053W 1188 nt3.15□□□□□ -1.91
RRP40Q08285 DDP1YOR163W 567 nt3.15□□□□□ -1.91
RRP40Q08285 SUI3YPL237W 858 nt3.15□□□□□ -1.91
RRP40Q08285 HUT1YPL244C 1020 nt3.15□□□□□ -1.91
RRP40Q08285 MRPL51YPR100W 423 nt3.15□□□□□ -1.91
RRP40Q08285 MRS2YOR334W 1413 nt3.15□□□□□ -1.91
RRP40Q08285 IMD4YML056C 1575 nt3.15□□□□□ -1.91
RRP40Q08285 VID27YNL212W 2349 nt3.15□□□□□ -1.91
RRP40Q08285 GSC2YGR032W 5688 nt3.15□□□□□ -1.91
RRP40Q08285 POL31YJR006W 1464 nt3.15□□□□□ -1.91
RRP40Q08285 MGA1YGR249W 1371 nt3.14□□□□□ -1.91
RRP40Q08285 OPI6YDL096C 327 nt3.14□□□□□ -1.91
RRP40Q08285 MGT1YDL200C 567 nt3.14□□□□□ -1.91
RRP40Q08285 RPC11YDR045C 333 nt3.14□□□□□ -1.91
RRP40Q08285 YDR090CYDR090C 933 nt3.14□□□□□ -1.91
RRP40Q08285 ERV29YGR284C 933 nt3.14□□□□□ -1.91
RRP40Q08285 REE1YJL217W 597 nt3.14□□□□□ -1.91
RRP40Q08285 RPS28BYLR264W 204 nt3.14□□□□□ -1.91
RRP40Q08285 RAD33YML011C 534 nt3.14□□□□□ -1.91
RRP40Q08285 INN1YNL152W 1230 nt3.14□□□□□ -1.91
RRP40Q08285 RPS7AYOR096W 573 nt3.14□□□□□ -1.91
RRP40Q08285 GLC3YEL011W 2115 nt3.14□□□□□ -1.91
RRP40Q08285 GPI1YGR216C 1830 nt3.14□□□□□ -1.91
RRP40Q08285 STT4YLR305C 5703 nt3.14□□□□□ -1.91
RRP40Q08285 LCB5YLR260W 2064 nt3.13□□□□□ -1.91
RRP40Q08285 PSF1YDR013W 627 nt3.13□□□□□ -1.91
RRP40Q08285 HAT2YEL056W 1206 nt3.13□□□□□ -1.91
RRP40Q08285 USE1YGL098W 738 nt3.13□□□□□ -1.91
RRP40Q08285 POG1YIL122W 1056 nt3.13□□□□□ -1.91
RRP40Q08285 TRI1YMR233W 681 nt3.13□□□□□ -1.91
RRP40Q08285 YOR338WYOR338W 1092 nt3.13□□□□□ -1.91
RRP40Q08285 THR4YCR053W 1545 nt3.13□□□□□ -1.91
RRP40Q08285 RRN7YJL025W 1545 nt3.13□□□□□ -1.91
RRP40Q08285 TDA3YHR009C 1572 nt3.12□□□□□ -1.91
RRP40Q08285 TCP1YDR212W 1680 nt3.12□□□□□ -1.91
RRP40Q08285 VAM10YOR068C 345 nt3.12□□□□□ -1.91
RRP40Q08285 BMT2YBR141C 1014 nt3.12□□□□□ -1.91
RRP40Q08285 EPO1YMR124W 2832 nt3.12□□□□□ -1.91
RRP40Q08285 SAS4YDR181C 1446 nt3.11□□□□□ -1.91
RRP40Q08285 tK(UUU)DtK(UUU)D 73 nt3.11□□□□□ -1.91
RRP40Q08285 tK(UUU)G1tK(UUU)G1 73 nt3.11□□□□□ -1.91
RRP40Q08285 tK(UUU)G2tK(UUU)G2 73 nt3.11□□□□□ -1.91
RRP40Q08285 tK(UUU)KtK(UUU)K 73 nt3.11□□□□□ -1.91
RRP40Q08285 tK(UUU)LtK(UUU)L 73 nt3.11□□□□□ -1.91
RRP40Q08285 tK(UUU)OtK(UUU)O 73 nt3.11□□□□□ -1.91
RRP40Q08285 tK(UUU)PtK(UUU)P 73 nt3.11□□□□□ -1.91
RRP40Q08285 YAL004WYAL004W 648 nt3.11□□□□□ -1.91
RRP40Q08285 YAL064W-BYAL064W-B 381 nt3.11□□□□□ -1.91
RRP40Q08285 GOT1YMR292W 417 nt3.11□□□□□ -1.91
RRP40Q08285 SSE2YBR169C 2082 nt3.11□□□□□ -1.91
RRP40Q08285 STU2YLR045C 2667 nt3.11□□□□□ -1.91
RRP40Q08285 ALG1YBR110W 1350 nt3.11□□□□□ -1.91
RRP40Q08285 PGS1YCL004W 1566 nt3.1□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms