Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX6-1P78426 AP005435.1-201ENST00000529293 1178 ntBASIC18.96■□□□□ 0.63
NKX6-1P78426 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NKX6-1P78426 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NKX6-1P78426 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NKX6-1P78426 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-1P78426 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NKX6-1P78426 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX6-1P78426 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NKX6-1P78426 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NKX6-1P78426 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-1P78426 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX6-1P78426 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX6-1P78426 TERF1P2-201ENST00000583350 1212 ntBASIC18.95■□□□□ 0.62
NKX6-1P78426 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-1P78426 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NKX6-1P78426 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-1P78426 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
NKX6-1P78426 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-1P78426 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-1P78426 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NKX6-1P78426 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-1P78426 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX6-1P78426 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-1P78426 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-1P78426 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-1P78426 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NKX6-1P78426 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-1P78426 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NKX6-1P78426 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-1P78426 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-1P78426 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX6-1P78426 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-1P78426 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NKX6-1P78426 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.94■□□□□ 0.62
NKX6-1P78426 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.94■□□□□ 0.62
NKX6-1P78426 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
NKX6-1P78426 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NKX6-1P78426 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NKX6-1P78426 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
NKX6-1P78426 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.93■□□□□ 0.62
NKX6-1P78426 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.93■□□□□ 0.62
NKX6-1P78426 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.93■□□□□ 0.62
NKX6-1P78426 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.93■□□□□ 0.62
NKX6-1P78426 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-1P78426 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX6-1P78426 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX6-1P78426 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NKX6-1P78426 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NKX6-1P78426 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX6-1P78426 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX6-1P78426 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX6-1P78426 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX6-1P78426 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NKX6-1P78426 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX6-1P78426 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-1P78426 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NKX6-1P78426 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX6-1P78426 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-1P78426 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-1P78426 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX6-1P78426 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.91■□□□□ 0.62
NKX6-1P78426 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.91■□□□□ 0.62
NKX6-1P78426 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX6-1P78426 AC080038.1-201ENST00000611274 1154 ntBASIC18.91■□□□□ 0.62
NKX6-1P78426 AC068587.7-201ENST00000641602 218 ntBASIC18.91■□□□□ 0.62
NKX6-1P78426 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-1P78426 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-1P78426 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-1P78426 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX6-1P78426 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-1P78426 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.91■□□□□ 0.62
NKX6-1P78426 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-1P78426 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.9■□□□□ 0.62
NKX6-1P78426 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-1P78426 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-1P78426 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-1P78426 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.9■□□□□ 0.62
NKX6-1P78426 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms