Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDH4P55283 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDH4P55283 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CDH4P55283 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDH4P55283 AP004607.7-201ENST00000527152 1677 ntBASIC22.14■■□□□ 1.14
CDH4P55283 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.14■■□□□ 1.14
CDH4P55283 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDH4P55283 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDH4P55283 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDH4P55283 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
CDH4P55283 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CDH4P55283 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CDH4P55283 AC034268.1-201ENST00000441047 882 ntBASIC22.14■■□□□ 1.13
CDH4P55283 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDH4P55283 AL034346.1-201ENST00000568244 1277 ntBASIC22.14■■□□□ 1.13
CDH4P55283 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDH4P55283 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDH4P55283 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDH4P55283 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDH4P55283 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH4P55283 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CDH4P55283 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH4P55283 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.13■■□□□ 1.13
CDH4P55283 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.13■■□□□ 1.13
CDH4P55283 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CDH4P55283 AC080038.3-201ENST00000623346 1952 ntBASIC22.13■■□□□ 1.13
CDH4P55283 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH4P55283 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDH4P55283 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH4P55283 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CDH4P55283 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDH4P55283 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.13■■□□□ 1.13
CDH4P55283 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.13■■□□□ 1.13
CDH4P55283 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CDH4P55283 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.13■■□□□ 1.13
CDH4P55283 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CDH4P55283 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.13■■□□□ 1.13
CDH4P55283 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CDH4P55283 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.13■■□□□ 1.13
CDH4P55283 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH4P55283 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.12■■□□□ 1.13
CDH4P55283 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH4P55283 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH4P55283 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
CDH4P55283 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDH4P55283 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDH4P55283 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDH4P55283 KRT18P14-201ENST00000534205 1250 ntBASIC22.12■■□□□ 1.13
CDH4P55283 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.12■■□□□ 1.13
CDH4P55283 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.12■■□□□ 1.13
CDH4P55283 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.12■■□□□ 1.13
CDH4P55283 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH4P55283 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.11■■□□□ 1.13
CDH4P55283 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 AC005224.4-201ENST00000583262 1652 ntBASIC22.11■■□□□ 1.13
CDH4P55283 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.11■■□□□ 1.13
CDH4P55283 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CDH4P55283 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.11■■□□□ 1.13
CDH4P55283 DUX4L2-201ENST00000561772 1275 ntBASIC22.11■■□□□ 1.13
CDH4P55283 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.11■■□□□ 1.13
CDH4P55283 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
CDH4P55283 DUX4L6-201ENST00000626483 1275 ntBASIC22.11■■□□□ 1.13
CDH4P55283 DUX4L1-201ENST00000627662 1275 ntBASIC22.11■■□□□ 1.13
CDH4P55283 DUX4L8-201ENST00000629013 1275 ntBASIC22.11■■□□□ 1.13
CDH4P55283 DUX4L3-201ENST00000630187 1275 ntBASIC22.11■■□□□ 1.13
CDH4P55283 DUX4L7-201ENST00000630678 1275 ntBASIC22.11■■□□□ 1.13
CDH4P55283 DUX4L5-201ENST00000630834 1275 ntBASIC22.11■■□□□ 1.13
CDH4P55283 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.11■■□□□ 1.13
CDH4P55283 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDH4P55283 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH4P55283 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH4P55283 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDH4P55283 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.1■■□□□ 1.13
CDH4P55283 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH4P55283 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.1■■□□□ 1.13
CDH4P55283 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH4P55283 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH4P55283 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH4P55283 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.1■■□□□ 1.13
CDH4P55283 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH4P55283 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CDH4P55283 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH4P55283 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.09■■□□□ 1.13
CDH4P55283 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.09■■□□□ 1.13
CDH4P55283 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CDH4P55283 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.09■■□□□ 1.13
CDH4P55283 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.09■■□□□ 1.13
CDH4P55283 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDH4P55283 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.09■■□□□ 1.13
CDH4P55283 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.09■■□□□ 1.13
CDH4P55283 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH4P55283 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms