Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.84■□□□□ 0.13
APOC4P55056 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
APOC4P55056 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
APOC4P55056 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
APOC4P55056 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOC4P55056 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.84■□□□□ 0.13
APOC4P55056 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APOC4P55056 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
APOC4P55056 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APOC4P55056 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
APOC4P55056 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
APOC4P55056 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
APOC4P55056 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOC4P55056 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOC4P55056 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.83■□□□□ 0.12
APOC4P55056 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOC4P55056 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.83■□□□□ 0.12
APOC4P55056 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOC4P55056 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
APOC4P55056 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.83■□□□□ 0.12
APOC4P55056 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOC4P55056 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.83■□□□□ 0.12
APOC4P55056 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOC4P55056 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.83■□□□□ 0.12
APOC4P55056 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
APOC4P55056 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APOC4P55056 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
APOC4P55056 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.82■□□□□ 0.12
APOC4P55056 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.82■□□□□ 0.12
APOC4P55056 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.82■□□□□ 0.12
APOC4P55056 AC022517.1-201ENST00000592429 346 ntBASIC15.82■□□□□ 0.12
APOC4P55056 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.82■□□□□ 0.12
APOC4P55056 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
APOC4P55056 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC4P55056 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.81■□□□□ 0.12
APOC4P55056 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC4P55056 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
APOC4P55056 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 KRT19P1-201ENST00000405746 1186 ntBASIC15.81■□□□□ 0.12
APOC4P55056 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.81■□□□□ 0.12
APOC4P55056 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.81■□□□□ 0.12
APOC4P55056 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.81■□□□□ 0.12
APOC4P55056 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.81■□□□□ 0.12
APOC4P55056 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APOC4P55056 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.81■□□□□ 0.12
APOC4P55056 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.81■□□□□ 0.12
APOC4P55056 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC4P55056 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC4P55056 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
APOC4P55056 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC4P55056 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
APOC4P55056 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.8■□□□□ 0.12
APOC4P55056 AC005224.4-201ENST00000583262 1652 ntBASIC15.8■□□□□ 0.12
APOC4P55056 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.8■□□□□ 0.12
APOC4P55056 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC4P55056 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC4P55056 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC4P55056 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
APOC4P55056 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC4P55056 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC4P55056 THRA-202ENST00000394121 2260 ntTSL 2 BASIC15.8■□□□□ 0.12
APOC4P55056 DUSP8P5-201ENST00000422884 1815 ntBASIC15.8■□□□□ 0.12
APOC4P55056 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.79■□□□□ 0.12
APOC4P55056 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
APOC4P55056 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.79■□□□□ 0.12
APOC4P55056 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC4P55056 AC016769.1-201ENST00000409132 1010 ntBASIC15.79■□□□□ 0.12
APOC4P55056 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.79■□□□□ 0.12
APOC4P55056 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.79■□□□□ 0.12
APOC4P55056 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.79■□□□□ 0.12
APOC4P55056 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC4P55056 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC4P55056 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC4P55056 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms