Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR2JP52435 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2JP52435 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2JP52435 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2JP52435 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
POLR2JP52435 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
POLR2JP52435 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2JP52435 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
POLR2JP52435 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
POLR2JP52435 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2JP52435 AC239859.2-201ENST00000444165 318 ntBASIC20.63■□□□□ 0.89
POLR2JP52435 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2JP52435 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2JP52435 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR2JP52435 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
POLR2JP52435 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR2JP52435 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR2JP52435 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 TSPY9P-201ENST00000440215 945 ntBASIC20.62■□□□□ 0.89
POLR2JP52435 TSPY11P-201ENST00000442607 1045 ntBASIC20.62■□□□□ 0.89
POLR2JP52435 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
POLR2JP52435 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
POLR2JP52435 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
POLR2JP52435 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
POLR2JP52435 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2JP52435 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR2JP52435 AL031602.1-201ENST00000633169 911 ntBASIC20.61■□□□□ 0.89
POLR2JP52435 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR2JP52435 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2JP52435 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
POLR2JP52435 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 AC079089.2-201ENST00000531211 1277 ntBASIC20.6■□□□□ 0.89
POLR2JP52435 AL117332.1-201ENST00000622628 974 ntBASIC20.6■□□□□ 0.89
POLR2JP52435 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLR2JP52435 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2JP52435 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
POLR2JP52435 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
POLR2JP52435 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
POLR2JP52435 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
POLR2JP52435 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR2JP52435 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 AC241377.3-202ENST00000626088 1088 ntBASIC20.59■□□□□ 0.89
POLR2JP52435 AC241585.3-202ENST00000628937 1088 ntBASIC20.59■□□□□ 0.89
POLR2JP52435 AC245100.8-202ENST00000629247 1058 ntBASIC20.59■□□□□ 0.89
POLR2JP52435 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
POLR2JP52435 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR2JP52435 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR2JP52435 FEM1AP4-201ENST00000443167 1987 ntBASIC20.59■□□□□ 0.89
POLR2JP52435 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR2JP52435 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR2JP52435 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR2JP52435 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.58■□□□□ 0.89
POLR2JP52435 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR2JP52435 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR2JP52435 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR2JP52435 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR2JP52435 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR2JP52435 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms