Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.64■□□□□ 0.41
NKX2-1P43699 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.64■□□□□ 0.41
NKX2-1P43699 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.64■□□□□ 0.41
NKX2-1P43699 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.64■□□□□ 0.41
NKX2-1P43699 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-1P43699 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-1P43699 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NKX2-1P43699 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.64■□□□□ 0.41
NKX2-1P43699 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-1P43699 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NKX2-1P43699 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NKX2-1P43699 FEM1AP4-201ENST00000443167 1987 ntBASIC17.63■□□□□ 0.41
NKX2-1P43699 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NKX2-1P43699 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 NTF6A-201ENST00000591175 560 ntBASIC17.63■□□□□ 0.41
NKX2-1P43699 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NKX2-1P43699 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-1P43699 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.63■□□□□ 0.41
NKX2-1P43699 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.63■□□□□ 0.41
NKX2-1P43699 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NKX2-1P43699 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.62■□□□□ 0.41
NKX2-1P43699 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 CA15P2-201ENST00000611168 834 ntBASIC17.62■□□□□ 0.41
NKX2-1P43699 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 LINC01521-201ENST00000504184 1943 ntBASIC17.62■□□□□ 0.41
NKX2-1P43699 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX2-1P43699 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
NKX2-1P43699 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 AL121603.2-201ENST00000557373 2117 ntBASIC17.62■□□□□ 0.41
NKX2-1P43699 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-1P43699 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NKX2-1P43699 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-1P43699 AF106564.1-201ENST00000607058 2553 ntBASIC17.61■□□□□ 0.41
NKX2-1P43699 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-1P43699 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-1P43699 KRT18P60-201ENST00000312876 1297 ntBASIC17.61■□□□□ 0.41
NKX2-1P43699 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.61■□□□□ 0.41
NKX2-1P43699 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.61■□□□□ 0.41
NKX2-1P43699 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-1P43699 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NKX2-1P43699 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX2-1P43699 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.6■□□□□ 0.41
NKX2-1P43699 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.6■□□□□ 0.41
NKX2-1P43699 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 AL157384.1-201ENST00000445995 2473 ntBASIC17.6■□□□□ 0.41
NKX2-1P43699 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NKX2-1P43699 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX2-1P43699 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
NKX2-1P43699 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX2-1P43699 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NKX2-1P43699 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-1P43699 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX2-1P43699 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-1P43699 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
NKX2-1P43699 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.59■□□□□ 0.41
NKX2-1P43699 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-1P43699 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms