Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 CGR1YGL029W 363 nt3.23□□□□□ -1.89
CDC40P40968 YHR112CYHR112C 1137 nt3.23□□□□□ -1.89
CDC40P40968 SKN7YHR206W 1869 nt3.23□□□□□ -1.89
CDC40P40968 ATP12YJL180C 978 nt3.23□□□□□ -1.89
CDC40P40968 MRP8YKL142W 660 nt3.23□□□□□ -1.89
CDC40P40968 YKT6YKL196C 603 nt3.23□□□□□ -1.89
CDC40P40968 PBI1YPL272C 1554 nt3.23□□□□□ -1.89
CDC40P40968 RTC1YOL138C 4026 nt3.22□□□□□ -1.89
CDC40P40968 MNT4YNR059W 1743 nt3.22□□□□□ -1.89
CDC40P40968 QRI7YDL104C 1224 nt3.22□□□□□ -1.89
CDC40P40968 YEL053W-AYEL053W-A 348 nt3.22□□□□□ -1.89
CDC40P40968 YER076CYER076C 909 nt3.22□□□□□ -1.89
CDC40P40968 DDI2YFL061W 678 nt3.22□□□□□ -1.89
CDC40P40968 YGL108CYGL108C 423 nt3.22□□□□□ -1.89
CDC40P40968 YIL165CYIL165C 360 nt3.22□□□□□ -1.89
CDC40P40968 DID4YKL002W 699 nt3.22□□□□□ -1.89
CDC40P40968 RPP0YLR340W 939 nt3.22□□□□□ -1.89
CDC40P40968 ATG33YLR356W 594 nt3.22□□□□□ -1.89
CDC40P40968 SPO20YMR017W 1194 nt3.22□□□□□ -1.89
CDC40P40968 YMR310CYMR310C 954 nt3.22□□□□□ -1.89
CDC40P40968 TEX1YNL253W 1269 nt3.22□□□□□ -1.89
CDC40P40968 DDI3YNL335W 678 nt3.22□□□□□ -1.89
CDC40P40968 MGR2YPL098C 342 nt3.22□□□□□ -1.89
CDC40P40968 SIZ1YDR409W 2715 nt3.22□□□□□ -1.89
CDC40P40968 ERG5YMR015C 1617 nt3.22□□□□□ -1.89
CDC40P40968 FOX2YKR009C 2703 nt3.21□□□□□ -1.89
CDC40P40968 PLM2YDR501W 1566 nt3.21□□□□□ -1.89
CDC40P40968 NOP58YOR310C 1536 nt3.21□□□□□ -1.9
CDC40P40968 YDL241WYDL241W 372 nt3.21□□□□□ -1.9
CDC40P40968 YDR340WYDR340W 303 nt3.21□□□□□ -1.9
CDC40P40968 YER145C-AYER145C-A 438 nt3.21□□□□□ -1.9
CDC40P40968 MRPL6YHR147C 645 nt3.21□□□□□ -1.9
CDC40P40968 GAT3YLR013W 426 nt3.21□□□□□ -1.9
CDC40P40968 PCD1YLR151C 1023 nt3.21□□□□□ -1.9
CDC40P40968 YLR154W-BYLR154W-B 165 nt3.21□□□□□ -1.9
CDC40P40968 BUR2YLR226W 1188 nt3.21□□□□□ -1.9
CDC40P40968 YBL036CYBL036C 774 nt3.21□□□□□ -1.9
CDC40P40968 YOR238WYOR238W 912 nt3.21□□□□□ -1.9
CDC40P40968 GPI2YPL076W 843 nt3.21□□□□□ -1.9
CDC40P40968 AEP2YMR282C 1743 nt3.21□□□□□ -1.9
CDC40P40968 SIN4YNL236W 2925 nt3.2□□□□□ -1.9
CDC40P40968 DBP5YOR046C 1449 nt3.2□□□□□ -1.9
CDC40P40968 MIP6YHR015W 1980 nt3.2□□□□□ -1.9
CDC40P40968 CLN2YPL256C 1638 nt3.2□□□□□ -1.9
CDC40P40968 ARG2YJL071W 1725 nt3.2□□□□□ -1.9
CDC40P40968 YDL162CYDL162C 357 nt3.2□□□□□ -1.9
CDC40P40968 POP6YGR030C 477 nt3.2□□□□□ -1.9
CDC40P40968 YAR075WYAR075W 474 nt3.2□□□□□ -1.9
CDC40P40968 YNL162W-AYNL162W-A 219 nt3.2□□□□□ -1.9
CDC40P40968 RPC34YNR003C 954 nt3.2□□□□□ -1.9
CDC40P40968 YOR020W-AYOR020W-A 273 nt3.2□□□□□ -1.9
CDC40P40968 CIN5YOR028C 888 nt3.2□□□□□ -1.9
CDC40P40968 DGA1YOR245C 1257 nt3.2□□□□□ -1.9
CDC40P40968 RRP36YOR287C 903 nt3.2□□□□□ -1.9
CDC40P40968 GRX1YCL035C 333 nt3.2□□□□□ -1.9
CDC40P40968 HEF3YNL014W 3135 nt3.2□□□□□ -1.9
CDC40P40968 AIP1YMR092C 1848 nt3.19□□□□□ -1.9
CDC40P40968 DET1YDR051C 1005 nt3.19□□□□□ -1.9
CDC40P40968 YDR355CYDR355C 303 nt3.19□□□□□ -1.9
CDC40P40968 YDR431WYDR431W 312 nt3.19□□□□□ -1.9
CDC40P40968 MIG3YER028C 1185 nt3.19□□□□□ -1.9
CDC40P40968 LDS2YOL047C 1071 nt3.19□□□□□ -1.9
CDC40P40968 NUF2YOL069W 1356 nt3.19□□□□□ -1.9
CDC40P40968 MEK1YOR351C 1494 nt3.19□□□□□ -1.9
CDC40P40968 ATG21YPL100W 1491 nt3.19□□□□□ -1.9
CDC40P40968 YDL199CYDL199C 2064 nt3.19□□□□□ -1.9
CDC40P40968 LYP1YNL268W 1836 nt3.19□□□□□ -1.9
CDC40P40968 GCN5YGR252W 1320 nt3.19□□□□□ -1.9
CDC40P40968 YER034WYER034W 558 nt3.18□□□□□ -1.9
CDC40P40968 MAK16YAL025C 921 nt3.18□□□□□ -1.9
CDC40P40968 GMH1YKR030W 822 nt3.18□□□□□ -1.9
CDC40P40968 YBR089WYBR089W 600 nt3.18□□□□□ -1.9
CDC40P40968 SAF1YBR280C 1914 nt3.18□□□□□ -1.9
CDC40P40968 ATP25YMR098C 1839 nt3.17□□□□□ -1.9
CDC40P40968 ELO2YCR034W 1044 nt3.17□□□□□ -1.9
CDC40P40968 NHP10YDL002C 612 nt3.17□□□□□ -1.9
CDC40P40968 STE14YDR410C 720 nt3.17□□□□□ -1.9
CDC40P40968 IZH1YDR492W 951 nt3.17□□□□□ -1.9
CDC40P40968 PMI40YER003C 1290 nt3.17□□□□□ -1.9
CDC40P40968 SOL3YHR163W 750 nt3.17□□□□□ -1.9
CDC40P40968 CAP2YIL034C 864 nt3.17□□□□□ -1.9
CDC40P40968 PCL7YIL050W 858 nt3.17□□□□□ -1.9
CDC40P40968 PEX11YOL147C 711 nt3.17□□□□□ -1.9
CDC40P40968 RAS1YOR101W 930 nt3.17□□□□□ -1.9
CDC40P40968 HNT3YOR258W 654 nt3.17□□□□□ -1.9
CDC40P40968 FDH1YOR388C 1131 nt3.17□□□□□ -1.9
CDC40P40968 OSH3YHR073W 2991 nt3.16□□□□□ -1.9
CDC40P40968 RDI1YDL135C 609 nt3.16□□□□□ -1.9
CDC40P40968 KEG1YFR042W 603 nt3.16□□□□□ -1.9
CDC40P40968 PTI1YGR156W 1278 nt3.16□□□□□ -1.9
CDC40P40968 CFD1YIL003W 882 nt3.16□□□□□ -1.9
CDC40P40968 YIL156W-AYIL156W-A 402 nt3.16□□□□□ -1.9
CDC40P40968 SET1YHR119W 3243 nt3.16□□□□□ -1.9
CDC40P40968 YJR030CYJR030C 2238 nt3.16□□□□□ -1.9
CDC40P40968 APE2YKL157W 2859 nt3.15□□□□□ -1.9
CDC40P40968 VPS17YOR132W 1656 nt3.15□□□□□ -1.9
CDC40P40968 YDL026WYDL026W 312 nt3.15□□□□□ -1.91
CDC40P40968 SPC19YDR201W 498 nt3.15□□□□□ -1.91
CDC40P40968 LRS4YDR439W 1044 nt3.15□□□□□ -1.91
CDC40P40968 VFA1YER128W 612 nt3.15□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms