Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SHC1P29353 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.76■□□□□ 0.75
SHC1P29353 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC1P29353 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 LINC01960-201ENST00000563759 1884 ntBASIC19.75■□□□□ 0.75
SHC1P29353 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SHC1P29353 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.75■□□□□ 0.75
SHC1P29353 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SHC1P29353 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.75■□□□□ 0.75
SHC1P29353 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.75■□□□□ 0.75
SHC1P29353 AL031602.1-201ENST00000633169 911 ntBASIC19.75■□□□□ 0.75
SHC1P29353 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC1P29353 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.75■□□□□ 0.75
SHC1P29353 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SHC1P29353 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC1P29353 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.74■□□□□ 0.75
SHC1P29353 AC091305.1-201ENST00000479476 895 ntBASIC19.74■□□□□ 0.75
SHC1P29353 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC1P29353 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SHC1P29353 CA15P2-201ENST00000611168 834 ntBASIC19.74■□□□□ 0.75
SHC1P29353 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC1P29353 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC1P29353 AC087742.1-201ENST00000575880 1738 ntBASIC19.73■□□□□ 0.75
SHC1P29353 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 AC126544.1-201ENST00000580842 1059 ntBASIC19.73■□□□□ 0.75
SHC1P29353 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC1P29353 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.73■□□□□ 0.75
SHC1P29353 PKD1P6-201ENST00000343738 4769 ntBASIC19.73■□□□□ 0.75
SHC1P29353 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SHC1P29353 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SHC1P29353 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC1P29353 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.72■□□□□ 0.75
SHC1P29353 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 RASA4CP-201ENST00000424092 1398 ntBASIC19.72■□□□□ 0.75
SHC1P29353 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.72■□□□□ 0.75
SHC1P29353 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SHC1P29353 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.72■□□□□ 0.75
SHC1P29353 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SHC1P29353 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SHC1P29353 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.72■□□□□ 0.75
SHC1P29353 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC1P29353 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.71■□□□□ 0.75
SHC1P29353 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.71■□□□□ 0.75
SHC1P29353 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.71■□□□□ 0.75
SHC1P29353 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.71■□□□□ 0.75
SHC1P29353 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.71■□□□□ 0.75
SHC1P29353 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.71■□□□□ 0.75
SHC1P29353 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SHC1P29353 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC1P29353 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.71■□□□□ 0.75
SHC1P29353 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
SHC1P29353 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC1P29353 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC1P29353 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC1P29353 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms