Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.61■□□□□ 0.73
GDF1P27539 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
GDF1P27539 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.6■□□□□ 0.73
GDF1P27539 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.6■□□□□ 0.73
GDF1P27539 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.6■□□□□ 0.73
GDF1P27539 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.6■□□□□ 0.73
GDF1P27539 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.6■□□□□ 0.73
GDF1P27539 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.6■□□□□ 0.73
GDF1P27539 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GDF1P27539 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.6■□□□□ 0.73
GDF1P27539 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDF1P27539 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GDF1P27539 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GDF1P27539 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GDF1P27539 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.59■□□□□ 0.73
GDF1P27539 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GDF1P27539 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.59■□□□□ 0.73
GDF1P27539 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GDF1P27539 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDF1P27539 AC087742.1-201ENST00000575880 1738 ntBASIC19.59■□□□□ 0.73
GDF1P27539 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.59■□□□□ 0.73
GDF1P27539 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GDF1P27539 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
GDF1P27539 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GDF1P27539 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.58■□□□□ 0.72
GDF1P27539 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
GDF1P27539 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GDF1P27539 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.58■□□□□ 0.72
GDF1P27539 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GDF1P27539 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
GDF1P27539 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.58■□□□□ 0.72
GDF1P27539 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GDF1P27539 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.58■□□□□ 0.72
GDF1P27539 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
GDF1P27539 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GDF1P27539 AC009237.3-201ENST00000393279 1427 ntBASIC19.58■□□□□ 0.72
GDF1P27539 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GDF1P27539 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GDF1P27539 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GDF1P27539 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.57■□□□□ 0.72
GDF1P27539 AP004607.7-201ENST00000527152 1677 ntBASIC19.57■□□□□ 0.72
GDF1P27539 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GDF1P27539 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.57■□□□□ 0.72
GDF1P27539 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GDF1P27539 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.57■□□□□ 0.72
GDF1P27539 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GDF1P27539 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.56■□□□□ 0.72
GDF1P27539 C9orf163-202ENST00000624034 2573 ntBASIC19.56■□□□□ 0.72
GDF1P27539 AC005224.4-201ENST00000583262 1652 ntBASIC19.56■□□□□ 0.72
GDF1P27539 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.56■□□□□ 0.72
GDF1P27539 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.56■□□□□ 0.72
GDF1P27539 AC079140.4-201ENST00000507448 529 ntBASIC19.56■□□□□ 0.72
GDF1P27539 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.56■□□□□ 0.72
GDF1P27539 AC022517.1-201ENST00000592429 346 ntBASIC19.56■□□□□ 0.72
GDF1P27539 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GDF1P27539 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.56■□□□□ 0.72
GDF1P27539 LINC00526-201ENST00000581067 1875 ntBASIC19.56■□□□□ 0.72
GDF1P27539 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF1P27539 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF1P27539 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
GDF1P27539 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GDF1P27539 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GDF1P27539 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.55■□□□□ 0.72
GDF1P27539 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
GDF1P27539 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF1P27539 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF1P27539 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF1P27539 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.55■□□□□ 0.72
GDF1P27539 AC137767.1-201ENST00000602918 1920 ntBASIC19.55■□□□□ 0.72
GDF1P27539 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF1P27539 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF1P27539 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.54■□□□□ 0.72
GDF1P27539 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF1P27539 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.54■□□□□ 0.72
GDF1P27539 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
GDF1P27539 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.54■□□□□ 0.72
GDF1P27539 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.54■□□□□ 0.72
GDF1P27539 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GDF1P27539 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.54■□□□□ 0.72
GDF1P27539 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF1P27539 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.54■□□□□ 0.72
GDF1P27539 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms