Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VARSP26640 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARSP26640 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.15■□□□□ 0.98
VARSP26640 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARSP26640 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARSP26640 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.15■□□□□ 0.98
VARSP26640 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.15■□□□□ 0.98
VARSP26640 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.15■□□□□ 0.98
VARSP26640 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
VARSP26640 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARSP26640 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
VARSP26640 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VARSP26640 AC080038.3-201ENST00000623346 1952 ntBASIC21.15■□□□□ 0.98
VARSP26640 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARSP26640 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VARSP26640 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARSP26640 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
VARSP26640 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VARSP26640 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
VARSP26640 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
VARSP26640 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
VARSP26640 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.14■□□□□ 0.97
VARSP26640 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VARSP26640 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.14■□□□□ 0.97
VARSP26640 AC024257.2-201ENST00000549699 147 ntBASIC21.14■□□□□ 0.97
VARSP26640 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
VARSP26640 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.14■□□□□ 0.97
VARSP26640 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
VARSP26640 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
VARSP26640 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VARSP26640 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARSP26640 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.13■□□□□ 0.97
VARSP26640 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.13■□□□□ 0.97
VARSP26640 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.13■□□□□ 0.97
VARSP26640 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
VARSP26640 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VARSP26640 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
VARSP26640 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARSP26640 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
VARSP26640 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VARSP26640 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.13■□□□□ 0.97
VARSP26640 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.13■□□□□ 0.97
VARSP26640 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.13■□□□□ 0.97
VARSP26640 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.13■□□□□ 0.97
VARSP26640 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VARSP26640 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VARSP26640 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VARSP26640 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.12■□□□□ 0.97
VARSP26640 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.12■□□□□ 0.97
VARSP26640 AC010525.1-201ENST00000585559 441 ntBASIC21.12■□□□□ 0.97
VARSP26640 AL138724.1-201ENST00000606771 1088 ntBASIC21.12■□□□□ 0.97
VARSP26640 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 C11orf96-202ENST00000528572 1834 ntBASIC21.12■□□□□ 0.97
VARSP26640 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VARSP26640 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VARSP26640 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VARSP26640 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.12■□□□□ 0.97
VARSP26640 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VARSP26640 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.12■□□□□ 0.97
VARSP26640 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
VARSP26640 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 AC105265.2-201ENST00000467189 838 ntBASIC21.11■□□□□ 0.97
VARSP26640 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.11■□□□□ 0.97
VARSP26640 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
VARSP26640 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.11■□□□□ 0.97
VARSP26640 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARSP26640 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VARSP26640 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.1■□□□□ 0.97
VARSP26640 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VARSP26640 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARSP26640 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARSP26640 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.1■□□□□ 0.97
VARSP26640 AC091305.1-201ENST00000479476 895 ntBASIC21.1■□□□□ 0.97
VARSP26640 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.1■□□□□ 0.97
VARSP26640 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARSP26640 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VARSP26640 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms