Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.93■□□□□ 0.62
ATF1P18846 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.93■□□□□ 0.62
ATF1P18846 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATF1P18846 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATF1P18846 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
ATF1P18846 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ATF1P18846 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.92■□□□□ 0.62
ATF1P18846 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.92■□□□□ 0.62
ATF1P18846 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATF1P18846 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.92■□□□□ 0.62
ATF1P18846 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATF1P18846 AF106564.1-201ENST00000607058 2553 ntBASIC18.92■□□□□ 0.62
ATF1P18846 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
ATF1P18846 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.92■□□□□ 0.62
ATF1P18846 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF1P18846 Z98882.1-201ENST00000622160 2253 ntBASIC18.91■□□□□ 0.62
ATF1P18846 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.91■□□□□ 0.62
ATF1P18846 AL157384.1-201ENST00000445995 2473 ntBASIC18.91■□□□□ 0.62
ATF1P18846 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATF1P18846 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.91■□□□□ 0.62
ATF1P18846 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF1P18846 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATF1P18846 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.9■□□□□ 0.62
ATF1P18846 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATF1P18846 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.9■□□□□ 0.62
ATF1P18846 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.9■□□□□ 0.62
ATF1P18846 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.9■□□□□ 0.62
ATF1P18846 TSPY9P-201ENST00000440215 945 ntBASIC18.9■□□□□ 0.62
ATF1P18846 TSPY11P-201ENST00000442607 1045 ntBASIC18.9■□□□□ 0.62
ATF1P18846 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATF1P18846 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATF1P18846 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ATF1P18846 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ATF1P18846 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.89■□□□□ 0.61
ATF1P18846 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ATF1P18846 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.89■□□□□ 0.61
ATF1P18846 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ATF1P18846 FEM1AP4-201ENST00000443167 1987 ntBASIC18.89■□□□□ 0.61
ATF1P18846 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
ATF1P18846 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF1P18846 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATF1P18846 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.88■□□□□ 0.61
ATF1P18846 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATF1P18846 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.88■□□□□ 0.61
ATF1P18846 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATF1P18846 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATF1P18846 AC009299.2-201ENST00000482477 511 ntBASIC18.88■□□□□ 0.61
ATF1P18846 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF1P18846 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF1P18846 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF1P18846 C17orf82-201ENST00000623772 1530 ntBASIC18.88■□□□□ 0.61
ATF1P18846 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms