Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.85■■□□□ 1.89
COL11A2P13942 RARRES2P4-201ENST00000514074 484 ntBASIC26.85■■□□□ 1.89
COL11A2P13942 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL11A2P13942 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.85■■□□□ 1.89
COL11A2P13942 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL11A2P13942 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL11A2P13942 PRORSD1P-201ENST00000295112 541 ntBASIC26.85■■□□□ 1.89
COL11A2P13942 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL11A2P13942 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.85■■□□□ 1.89
COL11A2P13942 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.85■■□□□ 1.89
COL11A2P13942 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL11A2P13942 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
COL11A2P13942 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL11A2P13942 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL11A2P13942 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL11A2P13942 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.84■■□□□ 1.89
COL11A2P13942 KRT18P20-201ENST00000548986 1279 ntBASIC26.84■■□□□ 1.89
COL11A2P13942 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.84■■□□□ 1.89
COL11A2P13942 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
COL11A2P13942 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL11A2P13942 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL11A2P13942 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.83■■□□□ 1.89
COL11A2P13942 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL11A2P13942 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL11A2P13942 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.83■■□□□ 1.89
COL11A2P13942 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.83■■□□□ 1.89
COL11A2P13942 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.83■■□□□ 1.89
COL11A2P13942 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.83■■□□□ 1.89
COL11A2P13942 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.83■■□□□ 1.89
COL11A2P13942 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL11A2P13942 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL11A2P13942 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.82■■□□□ 1.88
COL11A2P13942 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL11A2P13942 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.82■■□□□ 1.88
COL11A2P13942 AC068338.2-201ENST00000563278 1430 ntBASIC26.82■■□□□ 1.88
COL11A2P13942 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL11A2P13942 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.82■■□□□ 1.88
COL11A2P13942 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
COL11A2P13942 MKRN4P-201ENST00000444706 1521 ntBASIC26.81■■□□□ 1.88
COL11A2P13942 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.81■■□□□ 1.88
COL11A2P13942 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.81■■□□□ 1.88
COL11A2P13942 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL11A2P13942 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL11A2P13942 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.81■■□□□ 1.88
COL11A2P13942 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
COL11A2P13942 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.81■■□□□ 1.88
COL11A2P13942 AC007322.4-201ENST00000509611 723 ntBASIC26.81■■□□□ 1.88
COL11A2P13942 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL11A2P13942 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
COL11A2P13942 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.81■■□□□ 1.88
COL11A2P13942 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
COL11A2P13942 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
COL11A2P13942 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.8■■□□□ 1.88
COL11A2P13942 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
COL11A2P13942 ABCB10P4-201ENST00000566803 2184 ntBASIC26.8■■□□□ 1.88
COL11A2P13942 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL11A2P13942 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL11A2P13942 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL11A2P13942 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
COL11A2P13942 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL11A2P13942 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
COL11A2P13942 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL11A2P13942 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL11A2P13942 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL11A2P13942 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.79■■□□□ 1.88
COL11A2P13942 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.79■■□□□ 1.88
COL11A2P13942 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
COL11A2P13942 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL11A2P13942 AL139125.2-201ENST00000623134 1869 ntBASIC26.78■■□□□ 1.88
COL11A2P13942 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
COL11A2P13942 LINC01124-201ENST00000409786 2117 ntBASIC26.78■■□□□ 1.88
COL11A2P13942 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
COL11A2P13942 AC016405.3-201ENST00000607710 860 ntBASIC26.78■■□□□ 1.88
COL11A2P13942 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
COL11A2P13942 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL11A2P13942 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL11A2P13942 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL11A2P13942 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL11A2P13942 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.77■■□□□ 1.88
COL11A2P13942 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.77■■□□□ 1.88
COL11A2P13942 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.76■■□□□ 1.88
COL11A2P13942 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.76■■□□□ 1.88
COL11A2P13942 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.76■■□□□ 1.88
COL11A2P13942 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.76■■□□□ 1.88
COL11A2P13942 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL11A2P13942 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
COL11A2P13942 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.76■■□□□ 1.87
COL11A2P13942 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL11A2P13942 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.76■■□□□ 1.87
COL11A2P13942 AC093787.1-201ENST00000450396 207 ntBASIC26.76■■□□□ 1.87
COL11A2P13942 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.76■■□□□ 1.87
COL11A2P13942 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.75■■□□□ 1.87
COL11A2P13942 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL11A2P13942 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL11A2P13942 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.75■■□□□ 1.87
COL11A2P13942 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL11A2P13942 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL11A2P13942 EEF1DP3-203ENST00000566025 782 ntBASIC26.74■■□□□ 1.87
COL11A2P13942 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL11A2P13942 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms