Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC31.32■■■□□ 2.6
CHGAP10645 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHGAP10645 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHGAP10645 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CHGAP10645 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC31.32■■■□□ 2.6
CHGAP10645 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
CHGAP10645 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.32■■■□□ 2.6
CHGAP10645 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHGAP10645 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHGAP10645 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHGAP10645 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
CHGAP10645 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHGAP10645 MFF-207ENST00000409565 1548 ntTSL 2 BASIC31.31■■■□□ 2.6
CHGAP10645 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
CHGAP10645 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.31■■■□□ 2.6
CHGAP10645 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC31.31■■■□□ 2.6
CHGAP10645 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC31.31■■■□□ 2.6
CHGAP10645 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.31■■■□□ 2.6
CHGAP10645 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.31■■■□□ 2.6
CHGAP10645 KRT18P6-201ENST00000555540 1265 ntBASIC31.31■■■□□ 2.6
CHGAP10645 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CHGAP10645 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC31.3■■■□□ 2.6
CHGAP10645 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.3■■■□□ 2.6
CHGAP10645 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC31.3■■■□□ 2.6
CHGAP10645 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHGAP10645 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHGAP10645 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHGAP10645 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
CHGAP10645 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.29■■■□□ 2.6
CHGAP10645 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.29■■■□□ 2.6
CHGAP10645 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.29■■■□□ 2.6
CHGAP10645 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.29■■■□□ 2.6
CHGAP10645 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHGAP10645 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHGAP10645 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHGAP10645 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CHGAP10645 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHGAP10645 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHGAP10645 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHGAP10645 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHGAP10645 SLC29A4P1-201ENST00000398760 971 ntBASIC31.28■■■□□ 2.6
CHGAP10645 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.28■■■□□ 2.6
CHGAP10645 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHGAP10645 AC055733.4-201ENST00000638462 1354 ntBASIC31.28■■■□□ 2.6
CHGAP10645 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHGAP10645 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHGAP10645 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CHGAP10645 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.27■■■□□ 2.6
CHGAP10645 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC31.27■■■□□ 2.6
CHGAP10645 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CHGAP10645 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CHGAP10645 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
CHGAP10645 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHGAP10645 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC31.25■■■□□ 2.59
CHGAP10645 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.25■■■□□ 2.59
CHGAP10645 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
CHGAP10645 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.25■■■□□ 2.59
CHGAP10645 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHGAP10645 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.24■■■□□ 2.59
CHGAP10645 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
CHGAP10645 MIR4651-201ENST00000582622 73 ntBASIC31.24■■■□□ 2.59
CHGAP10645 AC066615.1-201ENST00000640911 628 ntBASIC31.24■■■□□ 2.59
CHGAP10645 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHGAP10645 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHGAP10645 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHGAP10645 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHGAP10645 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.23■■■□□ 2.59
CHGAP10645 CNN2P6-201ENST00000439038 900 ntBASIC31.23■■■□□ 2.59
CHGAP10645 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC31.23■■■□□ 2.59
CHGAP10645 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHGAP10645 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHGAP10645 ANOS2P-203ENST00000472227 1816 ntBASIC31.22■■■□□ 2.59
CHGAP10645 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHGAP10645 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHGAP10645 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.22■■■□□ 2.59
CHGAP10645 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHGAP10645 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
CHGAP10645 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.21■■■□□ 2.59
CHGAP10645 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 AC105036.2-201ENST00000569468 176 ntBASIC31.21■■■□□ 2.59
CHGAP10645 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.21■■■□□ 2.59
CHGAP10645 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHGAP10645 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHGAP10645 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHGAP10645 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.2■■■□□ 2.59
CHGAP10645 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHGAP10645 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.2■■■□□ 2.59
CHGAP10645 AF201337.1-201ENST00000520239 748 ntBASIC31.2■■■□□ 2.59
CHGAP10645 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC31.2■■■□□ 2.59
CHGAP10645 AC079089.2-201ENST00000531211 1277 ntBASIC31.2■■■□□ 2.59
CHGAP10645 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CHGAP10645 AC098934.4-201ENST00000564127 592 ntBASIC31.2■■■□□ 2.59
CHGAP10645 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.2■■■□□ 2.59
CHGAP10645 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms