Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 CNN2P6-201ENST00000439038 900 ntBASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 DUSP8P5-201ENST00000422884 1815 ntBASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CSB-PGBD3P0DP91 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 AC133041.1-202ENST00000642053 222 ntBASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CSB-PGBD3P0DP91 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 AC055733.4-201ENST00000638462 1354 ntBASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
CSB-PGBD3P0DP91 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CSB-PGBD3P0DP91 AC098934.4-201ENST00000564127 592 ntBASIC28.84■■■□□ 2.21
CSB-PGBD3P0DP91 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
CSB-PGBD3P0DP91 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CSB-PGBD3P0DP91 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CSB-PGBD3P0DP91 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
CSB-PGBD3P0DP91 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 AC010536.3-201ENST00000620306 533 ntBASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.82■■■□□ 2.2
CSB-PGBD3P0DP91 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CSB-PGBD3P0DP91 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.81■■■□□ 2.2
CSB-PGBD3P0DP91 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.81■■■□□ 2.2
CSB-PGBD3P0DP91 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CSB-PGBD3P0DP91 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CSB-PGBD3P0DP91 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 APTR-203ENST00000430801 583 ntTSL 5 BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 AC010141.2-201ENST00000452426 721 ntBASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 AC133552.2-202ENST00000575694 574 ntBASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CSB-PGBD3P0DP91 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.79■■■□□ 2.2
CSB-PGBD3P0DP91 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 BMP1-204ENST00000397814 836 ntTSL 4 BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
CSB-PGBD3P0DP91 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms