Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNF728P0DKX0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF728P0DKX0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF728P0DKX0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF728P0DKX0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF728P0DKX0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ZNF728P0DKX0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.33■□□□□ 0.52
ZNF728P0DKX0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF728P0DKX0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF728P0DKX0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 DUX4L19-201ENST00000557448 1267 ntBASIC18.31■□□□□ 0.52
ZNF728P0DKX0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF728P0DKX0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF728P0DKX0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 AC006455.2-201ENST00000429931 906 ntBASIC18.29■□□□□ 0.52
ZNF728P0DKX0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZNF728P0DKX0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 AL499627.2-201ENST00000606283 725 ntBASIC18.28■□□□□ 0.52
ZNF728P0DKX0 pRNA.6-201ENST00000610482 90 ntBASIC18.28■□□□□ 0.52
ZNF728P0DKX0 pRNA.5-201ENST00000612139 90 ntBASIC18.28■□□□□ 0.52
ZNF728P0DKX0 pRNA.11-201ENST00000618423 90 ntBASIC18.28■□□□□ 0.52
ZNF728P0DKX0 pRNA.13-201ENST00000619112 90 ntBASIC18.28■□□□□ 0.52
ZNF728P0DKX0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 SYT6-210ENST00000641643 1587 ntBASIC18.28■□□□□ 0.52
ZNF728P0DKX0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF728P0DKX0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms