Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 OXCT2P1-201ENST00000447263 1535 ntBASIC13.69□□□□□ -0.22
APOBP04114 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBP04114 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.69□□□□□ -0.22
APOBP04114 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.69□□□□□ -0.22
APOBP04114 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.69□□□□□ -0.22
APOBP04114 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBP04114 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBP04114 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.69□□□□□ -0.22
APOBP04114 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC13.69□□□□□ -0.22
APOBP04114 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.68□□□□□ -0.22
APOBP04114 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.68□□□□□ -0.22
APOBP04114 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC13.68□□□□□ -0.22
APOBP04114 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
APOBP04114 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.68□□□□□ -0.22
APOBP04114 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.68□□□□□ -0.22
APOBP04114 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.68□□□□□ -0.22
APOBP04114 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.68□□□□□ -0.22
APOBP04114 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APOBP04114 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
APOBP04114 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.68□□□□□ -0.22
APOBP04114 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.68□□□□□ -0.22
APOBP04114 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.68□□□□□ -0.22
APOBP04114 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.68□□□□□ -0.22
APOBP04114 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOBP04114 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.68□□□□□ -0.22
APOBP04114 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOBP04114 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOBP04114 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.67□□□□□ -0.22
APOBP04114 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.67□□□□□ -0.22
APOBP04114 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOBP04114 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOBP04114 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
APOBP04114 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOBP04114 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.67□□□□□ -0.22
APOBP04114 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.67□□□□□ -0.22
APOBP04114 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.67□□□□□ -0.22
APOBP04114 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOBP04114 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOBP04114 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOBP04114 AC091874.3-201ENST00000512672 1195 ntBASIC13.67□□□□□ -0.22
APOBP04114 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.67□□□□□ -0.22
APOBP04114 MIR4497-201ENST00000583208 89 ntBASIC13.67□□□□□ -0.22
APOBP04114 ESRRAP1-201ENST00000400596 1257 ntBASIC13.66□□□□□ -0.22
APOBP04114 AC026366.1-201ENST00000488803 879 ntBASIC13.66□□□□□ -0.22
APOBP04114 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.66□□□□□ -0.22
APOBP04114 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOBP04114 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
APOBP04114 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.66□□□□□ -0.22
APOBP04114 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
APOBP04114 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.66□□□□□ -0.22
APOBP04114 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOBP04114 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.66□□□□□ -0.22
APOBP04114 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
APOBP04114 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOBP04114 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOBP04114 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOBP04114 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC13.66□□□□□ -0.22
APOBP04114 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOBP04114 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.66□□□□□ -0.22
APOBP04114 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.66□□□□□ -0.22
APOBP04114 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.66□□□□□ -0.22
APOBP04114 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOBP04114 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOBP04114 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOBP04114 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
APOBP04114 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOBP04114 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.66□□□□□ -0.22
APOBP04114 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
APOBP04114 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOBP04114 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOBP04114 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.65□□□□□ -0.22
APOBP04114 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
APOBP04114 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.65□□□□□ -0.22
APOBP04114 MIR4758-201ENST00000577688 71 ntBASIC13.65□□□□□ -0.22
APOBP04114 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.65□□□□□ -0.22
APOBP04114 AP006294.2-201ENST00000641667 209 ntBASIC13.65□□□□□ -0.22
APOBP04114 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms