Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 pRNA.6-201ENST00000610482 90 ntBASIC19.34■□□□□ 0.69
HLA-DQA2P01906 pRNA.5-201ENST00000612139 90 ntBASIC19.34■□□□□ 0.69
HLA-DQA2P01906 pRNA.11-201ENST00000618423 90 ntBASIC19.34■□□□□ 0.69
HLA-DQA2P01906 pRNA.13-201ENST00000619112 90 ntBASIC19.34■□□□□ 0.69
HLA-DQA2P01906 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQA2P01906 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA2P01906 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA2P01906 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA2P01906 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA2P01906 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA2P01906 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.33■□□□□ 0.69
HLA-DQA2P01906 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 AC099791.2-201ENST00000605725 427 ntBASIC19.33■□□□□ 0.68
HLA-DQA2P01906 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA2P01906 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 AC133637.1-201ENST00000624115 1537 ntBASIC19.32■□□□□ 0.68
HLA-DQA2P01906 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 AC006455.2-201ENST00000429931 906 ntBASIC19.32■□□□□ 0.68
HLA-DQA2P01906 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA2P01906 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 CA15P2-201ENST00000611168 834 ntBASIC19.31■□□□□ 0.68
HLA-DQA2P01906 AC007375.3-201ENST00000600936 2314 ntBASIC19.31■□□□□ 0.68
HLA-DQA2P01906 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA2P01906 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.3■□□□□ 0.68
HLA-DQA2P01906 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 SRD5A1P1-201ENST00000442297 786 ntBASIC19.3■□□□□ 0.68
HLA-DQA2P01906 MIR3621-201ENST00000580529 85 ntBASIC19.3■□□□□ 0.68
HLA-DQA2P01906 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA2P01906 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA2P01906 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms