Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 AL035685.1-201ENST00000636663 812 ntBASIC24.35■■□□□ 1.49
SMC2O95347 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.35■■□□□ 1.49
SMC2O95347 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMC2O95347 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
SMC2O95347 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC2O95347 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC2O95347 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC2O95347 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.34■■□□□ 1.49
SMC2O95347 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC2O95347 AL356740.2-201ENST00000601559 647 ntBASIC24.34■■□□□ 1.49
SMC2O95347 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.34■■□□□ 1.49
SMC2O95347 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.34■■□□□ 1.49
SMC2O95347 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SMC2O95347 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.34■■□□□ 1.49
SMC2O95347 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SMC2O95347 FAM99A-202ENST00000538190 1989 ntBASIC24.33■■□□□ 1.49
SMC2O95347 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC2O95347 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC2O95347 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
SMC2O95347 AC133637.1-201ENST00000624115 1537 ntBASIC24.33■■□□□ 1.49
SMC2O95347 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.33■■□□□ 1.49
SMC2O95347 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC2O95347 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC2O95347 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.33■■□□□ 1.48
SMC2O95347 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SMC2O95347 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.32■■□□□ 1.48
SMC2O95347 pRNA.6-201ENST00000610482 90 ntBASIC24.32■■□□□ 1.48
SMC2O95347 pRNA.5-201ENST00000612139 90 ntBASIC24.32■■□□□ 1.48
SMC2O95347 pRNA.11-201ENST00000618423 90 ntBASIC24.32■■□□□ 1.48
SMC2O95347 pRNA.13-201ENST00000619112 90 ntBASIC24.32■■□□□ 1.48
SMC2O95347 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SMC2O95347 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.32■■□□□ 1.48
SMC2O95347 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC2O95347 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.31■■□□□ 1.48
SMC2O95347 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SMC2O95347 AC010542.4-201ENST00000563151 1910 ntBASIC24.31■■□□□ 1.48
SMC2O95347 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.31■■□□□ 1.48
SMC2O95347 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMC2O95347 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMC2O95347 AC006455.2-201ENST00000429931 906 ntBASIC24.31■■□□□ 1.48
SMC2O95347 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.31■■□□□ 1.48
SMC2O95347 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.31■■□□□ 1.48
SMC2O95347 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMC2O95347 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.31■■□□□ 1.48
SMC2O95347 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC2O95347 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SMC2O95347 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.3■■□□□ 1.48
SMC2O95347 AL031602.1-201ENST00000633169 911 ntBASIC24.3■■□□□ 1.48
SMC2O95347 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC2O95347 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SMC2O95347 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.29■■□□□ 1.48
SMC2O95347 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC2O95347 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC2O95347 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC2O95347 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SMC2O95347 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.29■■□□□ 1.48
SMC2O95347 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.29■■□□□ 1.48
SMC2O95347 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.29■■□□□ 1.48
SMC2O95347 AC099791.2-201ENST00000605725 427 ntBASIC24.29■■□□□ 1.48
SMC2O95347 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.29■■□□□ 1.48
SMC2O95347 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.29■■□□□ 1.48
SMC2O95347 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.29■■□□□ 1.48
SMC2O95347 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC2O95347 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SMC2O95347 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC2O95347 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC2O95347 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SMC2O95347 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC2O95347 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SMC2O95347 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC2O95347 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.28■■□□□ 1.48
SMC2O95347 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.28■■□□□ 1.48
SMC2O95347 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMC2O95347 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC2O95347 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.28■■□□□ 1.48
SMC2O95347 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC2O95347 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SMC2O95347 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMC2O95347 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SMC2O95347 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMC2O95347 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms