Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 THRA-202ENST00000394121 2260 ntTSL 2 BASIC34.04■■■■□ 3.04
PCF11O94913 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC34.04■■■■□ 3.04
PCF11O94913 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC34.04■■■■□ 3.04
PCF11O94913 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC34.04■■■■□ 3.04
PCF11O94913 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
PCF11O94913 PPP1R14BP3-201ENST00000509033 445 ntBASIC34.03■■■■□ 3.04
PCF11O94913 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC34.03■■■■□ 3.04
PCF11O94913 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC34.03■■■■□ 3.04
PCF11O94913 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC34.03■■■■□ 3.04
PCF11O94913 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
PCF11O94913 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC34.03■■■■□ 3.04
PCF11O94913 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC34.03■■■■□ 3.04
PCF11O94913 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
PCF11O94913 LINC00526-201ENST00000581067 1875 ntBASIC34.02■■■■□ 3.04
PCF11O94913 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
PCF11O94913 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
PCF11O94913 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC34.02■■■■□ 3.04
PCF11O94913 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
PCF11O94913 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
PCF11O94913 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC34.02■■■■□ 3.04
PCF11O94913 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.03
PCF11O94913 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC34.01■■■■□ 3.03
PCF11O94913 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
PCF11O94913 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC34.01■■■■□ 3.03
PCF11O94913 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC34.01■■■■□ 3.03
PCF11O94913 AP006587.3-201ENST00000525742 1516 ntBASIC34■■■■□ 3.03
PCF11O94913 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC34■■■■□ 3.03
PCF11O94913 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC34■■■■□ 3.03
PCF11O94913 KRT18P11-201ENST00000435214 1283 ntBASIC34■■■■□ 3.03
PCF11O94913 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC34■■■■□ 3.03
PCF11O94913 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
PCF11O94913 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCF11O94913 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC33.99■■■■□ 3.03
PCF11O94913 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC33.99■■■■□ 3.03
PCF11O94913 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCF11O94913 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC33.99■■■■□ 3.03
PCF11O94913 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC33.99■■■■□ 3.03
PCF11O94913 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC33.99■■■■□ 3.03
PCF11O94913 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCF11O94913 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCF11O94913 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCF11O94913 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC33.99■■■■□ 3.03
PCF11O94913 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCF11O94913 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCF11O94913 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC33.98■■■■□ 3.03
PCF11O94913 AC011767.1-201ENST00000617410 1153 ntBASIC33.98■■■■□ 3.03
PCF11O94913 MYCNOS-205ENST00000641950 531 ntBASIC33.98■■■■□ 3.03
PCF11O94913 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC33.98■■■■□ 3.03
PCF11O94913 AC006970.2-201ENST00000450065 779 ntBASIC33.98■■■■□ 3.03
PCF11O94913 AC010141.2-201ENST00000452426 721 ntBASIC33.98■■■■□ 3.03
PCF11O94913 AC093827.2-201ENST00000512654 315 ntBASIC33.98■■■■□ 3.03
PCF11O94913 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC33.98■■■■□ 3.03
PCF11O94913 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC33.98■■■■□ 3.03
PCF11O94913 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC33.97■■■■□ 3.03
PCF11O94913 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC33.97■■■■□ 3.03
PCF11O94913 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
PCF11O94913 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
PCF11O94913 CD99P1-205ENST00000527459 561 ntBASIC33.97■■■■□ 3.03
PCF11O94913 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
PCF11O94913 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC33.96■■■■□ 3.03
PCF11O94913 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
PCF11O94913 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC33.96■■■■□ 3.03
PCF11O94913 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
PCF11O94913 AP004607.7-201ENST00000527152 1677 ntBASIC33.95■■■■□ 3.03
PCF11O94913 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC33.95■■■■□ 3.03
PCF11O94913 GUSBP6-202ENST00000438529 1198 ntBASIC33.95■■■■□ 3.03
PCF11O94913 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC33.95■■■■□ 3.03
PCF11O94913 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
PCF11O94913 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC33.95■■■■□ 3.03
PCF11O94913 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
PCF11O94913 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
PCF11O94913 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC33.95■■■■□ 3.02
PCF11O94913 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.02
PCF11O94913 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.02
PCF11O94913 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
PCF11O94913 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
PCF11O94913 MAP2K4P1-201ENST00000438453 1195 ntBASIC33.94■■■■□ 3.02
PCF11O94913 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC33.94■■■■□ 3.02
PCF11O94913 TFG-210ENST00000620299 1289 ntTSL 5 BASIC33.94■■■■□ 3.02
PCF11O94913 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC33.94■■■■□ 3.02
PCF11O94913 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC33.94■■■■□ 3.02
PCF11O94913 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
PCF11O94913 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
PCF11O94913 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
PCF11O94913 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC33.94■■■■□ 3.02
PCF11O94913 TSPY20P-201ENST00000450910 630 ntBASIC33.94■■■■□ 3.02
PCF11O94913 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
PCF11O94913 SERP1-208ENST00000491660 830 ntTSL 2 BASIC33.94■■■■□ 3.02
PCF11O94913 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC33.94■■■■□ 3.02
PCF11O94913 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC33.94■■■■□ 3.02
PCF11O94913 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC33.94■■■■□ 3.02
PCF11O94913 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
PCF11O94913 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
PCF11O94913 PARP1-202ENST00000366792 553 ntTSL 3 BASIC33.93■■■■□ 3.02
PCF11O94913 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC33.93■■■■□ 3.02
PCF11O94913 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC33.93■■■■□ 3.02
PCF11O94913 MAZ-216ENST00000616501 991 ntTSL 5 BASIC33.93■■■■□ 3.02
PCF11O94913 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
PCF11O94913 DUX4L16-201ENST00000555130 1264 ntBASIC33.92■■■■□ 3.02
PCF11O94913 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms